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Sgip1 Gene Detail
Summary
  • Symbol
    Sgip1
  • Name
    SH3-domain GRB2-like (endophilin) interacting protein 1
  • Synonyms
    3110007P09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920344
    NCBI Gene: 73094
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:102616351-102834623 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 47.09 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6223 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920344
 protein coding gene Chr4:102598494-102834623 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028501
 protein coding gene Chr4:103141265-103370832 (+)
A/J MGP_AJ_G0028464
 protein coding gene Chr4:99543867-99774424 (+)
AKR/J MGP_AKRJ_G0028411
 protein coding gene Chr4:101953925-102189750 (+)
BALB/cJ MGP_BALBcJ_G0028483
 protein coding gene Chr4:99739964-99968360 (+)
C3H/HeJ MGP_C3HHeJ_G0028197
 protein coding gene Chr4:102742455-102981466 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028923
 protein coding gene Chr4:107030152-107265955 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026214
 protein coding gene Chr4:94905681-95117035 (+)
CAST/EiJ MGP_CASTEiJ_G0027633
 protein coding gene Chr4:100497414-100736743 (+)
CBA/J MGP_CBAJ_G0028166
 protein coding gene Chr4:110416194-110670499 (+)
DBA/2J MGP_DBA2J_G0028314
 protein coding gene Chr4:99200841-99425621 (+)
FVB/NJ MGP_FVBNJ_G0028281
 protein coding gene Chr4:98052213-98281798 (+)
LP/J MGP_LPJ_G0028415
 protein coding gene Chr4:103451708-103671128 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028308
 protein coding gene Chr4:115892418-116132490 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028958
 protein coding gene Chr4:102161951-102409108 (+)
PWK/PhJ MGP_PWKPhJ_G0027359
 protein coding gene Chr4:97407965-97633465 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027183
 protein coding gene Chr4:99594123-99822561 (+)
WSB/EiJ MGP_WSBEiJ_G0027713
 protein coding gene Chr4:102346052-102574905 (+)



Homology
more
  • Human Ortholog
    SGIP1, SH3GL interacting endocytic adaptor 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SGIP1, SH3GL interacting endocytic adaptor 1
  • Links
    NCBI Gene ID: 84251
    neXtProt AC: NX_Q9BQI5
    UniProt: Q9BQI5

  • Chr Location
    1p31.3; chr1:66533267-66751139 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    37
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    801
  • Tissues
    56
  • cDNA Data
    19
  • Literature Summary
    7
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 73094 NCBI Gene Model | MGI Sequence Detail 218273 C57BL/6J ±  kb
    transcript NM_001285852 RefSeq | MGI Sequence Detail 5589 C57BL/6  
    polypeptide Q8VD37 UniProt | EBI | MGI Sequence Detail 806 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 21
      cDNA 19
      Primer pair 2

      Microarray probesets 6
    References
    more
    • Summaries
      All 48
      Developmental Gene Expression 7
      Gene Ontology 9
      Phenotypes 14
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory