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Poldip3 Gene Detail
Summary
  • Symbol
    Poldip3
  • Name
    polymerase (DNA-directed), delta interacting protein 3
  • Synonyms
    1110008P04Rik, PDIP46
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921076
    NCBI Gene: 73826
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:83010177-83033585 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 39.40 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    579 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921076
 protein coding gene Chr15:83010169-83033585 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022159
 protein coding gene Chr15:83789505-83815606 (-)
A/J MGP_AJ_G0022118
 protein coding gene Chr15:80740190-80763568 (-)
AKR/J MGP_AKRJ_G0022093
 protein coding gene Chr15:83052603-83078678 (-)
BALB/cJ MGP_BALBcJ_G0022124
 protein coding gene Chr15:80882689-80907285 (-)
C3H/HeJ MGP_C3HHeJ_G0021894
 protein coding gene Chr15:83049391-83074164 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022569
 protein coding gene Chr15:87026976-87052204 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020093
 protein coding gene Chr15:77125603-77150052 (-)
CAST/EiJ MGP_CASTEiJ_G0021416
 protein coding gene Chr15:83793232-83964969 (-)
CBA/J MGP_CBAJ_G0021861
 protein coding gene Chr15:89769446-89798898 (-)
DBA/2J MGP_DBA2J_G0021988
 protein coding gene Chr15:80232798-80256047 (-)
FVB/NJ MGP_FVBNJ_G0021967
 protein coding gene Chr15:79268927-79292235 (-)
LP/J MGP_LPJ_G0022059
 protein coding gene Chr15:83964443-83987782 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021987
 protein coding gene Chr15:94696928-94724855 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022584
 protein coding gene Chr15:83091341-83120182 (-)
PWK/PhJ MGP_PWKPhJ_G0021157
 protein coding gene Chr15:80208577-80229355 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020991
 protein coding gene Chr15:82811413-82838036 (-)
WSB/EiJ MGP_WSBEiJ_G0021465
 protein coding gene Chr15:83585591-83608870 (-)



Homology
more
  • Human Ortholog
    POLDIP3, DNA polymerase delta interacting protein 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    POLDIP3, DNA polymerase delta interacting protein 3
  • Synonyms
    PDIP3, PDIP46, SKAR
  • Links
    NCBI Gene ID: 84271
    neXtProt AC: NX_Q9BY77
    UniProt: Q9BY77

  • Chr Location
    22q13.2; chr22:42583721-42614962 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    28 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    739
  • Tissues
    28
  • cDNA Data
    191
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000041815 Ensembl Gene Model | MGI Sequence Detail 23409 C57BL/6J ±  kb
    transcript ENSMUST00000058793 Ensembl | MGI Sequence Detail 3299 Not Applicable  
    polypeptide ENSMUSP00000054548 Ensembl | MGI Sequence Detail 420 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 194
      Genomic 1
      cDNA 192
      Primer pair 1

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2145896, MGI:2146111, MGI:2146279
    References
    more
    • Summaries
      All 61
      Developmental Gene Expression 3
      Diseases 1
      Gene Ontology 6
      Phenotypes 28
    • Earliest
      J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
    • Latest
      J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory