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Zswim5 Gene Detail
Summary
  • Symbol
    Zswim5
  • Name
    zinc finger SWIM-type containing 5
  • Synonyms
    4933426E21Rik, mKIAA1511
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921714
    NCBI Gene: 74464
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:116734573-116846461 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 53.37 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2405 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921714
 protein coding gene Chr4:116731326-116846461 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028638
 protein coding gene Chr4:117820404-117936379 (+)
A/J MGP_AJ_G0028599
 protein coding gene Chr4:113283359-113392727 (+)
AKR/J MGP_AKRJ_G0028549
 protein coding gene Chr4:115751134-115867903 (+)
BALB/cJ MGP_BALBcJ_G0028620
 protein coding gene Chr4:113911135-114022722 (+)
C3H/HeJ MGP_C3HHeJ_G0028334
 protein coding gene Chr4:117318592-117432171 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029061
 protein coding gene Chr4:122361222-122481669 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026345
 protein coding gene Chr4:107330524-107439840 (+)
CAST/EiJ MGP_CASTEiJ_G0027768
 protein coding gene Chr4:114540171-114651650 (+)
CBA/J MGP_CBAJ_G0028301
 protein coding gene Chr4:125700848-125828835 (+)
DBA/2J MGP_DBA2J_G0028449
 protein coding gene Chr4:113919093-114029128 (+)
FVB/NJ MGP_FVBNJ_G0028417
 protein coding gene Chr4:112417707-112532113 (+)
LP/J MGP_LPJ_G0028551
 protein coding gene Chr4:118002637-118118040 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028444
 protein coding gene Chr4:130664712-130784570 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029098
 protein coding gene Chr4:116896441-117016381 (+)
PWK/PhJ MGP_PWKPhJ_G0027494
 protein coding gene Chr4:110698938-110815114 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027317
 protein coding gene Chr4:113186386-113306847 (+)
WSB/EiJ MGP_WSBEiJ_G0027847
 protein coding gene Chr4:116765442-116885662 (+)



Homology
more
  • Human Ortholog
    ZSWIM5, zinc finger SWIM-type containing 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZSWIM5, zinc finger SWIM-type containing 5
  • Links
    NCBI Gene ID: 57643
    neXtProt AC: NX_Q9P217
    UniProt: Q9P217

  • Chr Location
    1p34.1; chr1:45016399-45306209 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    15 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    745
  • Tissues
    19
  • cDNA Data
    6
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033948 Ensembl Gene Model | MGI Sequence Detail 111889 C57BL/6J ±  kb
transcript ENSMUST00000044823 Ensembl | MGI Sequence Detail 5582 Not Applicable  
polypeptide ENSMUSP00000049474 Ensembl | MGI Sequence Detail 1188 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    Genomic 2
    cDNA 6
    Primer pair 3
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140314
References
more
  • Summaries
    All 42
    Developmental Gene Expression 4
    Gene Ontology 2
    Phenotypes 15
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory