About   Help   FAQ
Ccdc33 Gene Detail
Summary
  • Symbol
    Ccdc33
  • Name
    coiled-coil domain containing 33
  • Synonyms
    4930535E21Rik, LOC382077
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922464
    NCBI Gene: 382077
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:57935960-58026106 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 31.63 cM, cytoband C
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2291 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922464
 protein coding gene Chr9:57935956-58026111 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034883
 protein coding gene Chr9:57294074-57385206 (-)
A/J MGP_AJ_G0034864
 protein coding gene Chr9:55427464-55525328 (-)
AKR/J MGP_AKRJ_G0034793
 protein coding gene Chr9:56727998-56818014 (-)
BALB/cJ MGP_BALBcJ_G0034856
 protein coding gene Chr9:55208545-55299329 (-)
C3H/HeJ MGP_C3HHeJ_G0034566
 protein coding gene Chr9:57194106-57289833 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035375
 protein coding gene Chr9:58873689-58969885 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032286
 protein coding gene Chr9:54719116-54811333 (-)
CAST/EiJ MGP_CASTEiJ_G0033887
 protein coding gene Chr9:57288414-57384446 (-)
CBA/J MGP_CBAJ_G0034537
 protein coding gene Chr9:60940767-61041863 (-)
DBA/2J MGP_DBA2J_G0034696
 protein coding gene Chr9:55291968-55382257 (-)
FVB/NJ MGP_FVBNJ_G0034638
 protein coding gene Chr9:54527138-54617272 (-)
LP/J MGP_LPJ_G0034779
 protein coding gene Chr9:57577539-57671650 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034681
 protein coding gene Chr9:62423438-62515330 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035397
 protein coding gene Chr9:56738142-56829656 (-)
PWK/PhJ MGP_PWKPhJ_G0033592
 protein coding gene Chr9:55331712-55424361 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033426
 protein coding gene Chr9:57004817-57101146 (-)
WSB/EiJ MGP_WSBEiJ_G0034000
 protein coding gene Chr9:56673772-56766172 (-)



Homology
more
  • Human Ortholog
    CCDC33, coiled-coil domain containing 33
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC33, coiled-coil domain containing 33
  • Synonyms
    CC2D3, CT61, HP11097
  • Links
    NCBI Gene ID: 80125
    neXtProt AC: NX_Q8N5R6
    UniProt: Q8N5R6

  • Chr Location
    15q24.1; chr15:74202705-74336472 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    751
  • Tissues
    37
  • cDNA Data
    11
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000037716 Ensembl Gene Model | MGI Sequence Detail 90147 C57BL/6J ±  kb
    transcript ENSMUST00000098682 Ensembl | MGI Sequence Detail 3117 Not Applicable  
    polypeptide ENSMUSP00000096279 Ensembl | MGI Sequence Detail 985 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 11
      cDNA 11

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:2685963
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 2
      Gene Ontology 2
      Phenotypes 9
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory