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4930558K02Rik Gene Detail
Summary
  • Symbol
    4930558K02Rik
  • Name
    RIKEN cDNA 4930558K02 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922618
    NCBI Gene: 75368
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:161769655-161807205 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 69.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1110 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922618
 protein coding gene Chr1:161769655-161809940 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016656
 protein coding gene Chr1:167247892-167286534 (-)
A/J MGP_AJ_G0016637
 protein coding gene Chr1:160439996-160479022 (-)
AKR/J MGP_AKRJ_G0016603
 protein coding gene Chr1:165318166-165355603 (-)
BALB/cJ MGP_BALBcJ_G0016598
 protein coding gene Chr1:160991737-161027708 (-)
C3H/HeJ MGP_C3HHeJ_G0016422
 protein coding gene Chr1:165519324-165572302 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017059
 protein coding gene Chr1:172905078-172943600 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014768
 protein coding gene Chr1:152531172-152571201 (-)
CAST/EiJ MGP_CASTEiJ_G0016002
 protein coding gene Chr1:165156895-165196917 (-)
CBA/J MGP_CBAJ_G0016397
 protein coding gene Chr1:179049787-179089895 (-)
DBA/2J MGP_DBA2J_G0016503
 protein coding gene Chr1:159406981-159443333 (-)
FVB/NJ MGP_FVBNJ_G0016501
 protein coding gene Chr1:157814350-157852152 (-)
LP/J MGP_LPJ_G0016574
 protein coding gene Chr1:168363120-168400397 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016526
 protein coding gene Chr1:186587330-186626201 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017095
 protein coding gene Chr1:165159822-165199117 (-)
PWK/PhJ MGP_PWKPhJ_G0015788
 protein coding gene Chr1:158583588-158620752 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015575
 protein coding gene Chr1:164036318-164076429 (-)
WSB/EiJ MGP_WSBEiJ_G0016064
 protein coding gene Chr1:165327113-165366906 (-)



Homology
more
  • Human Ortholog
    C1orf105, chromosome 1 open reading frame 105
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C1orf105, chromosome 1 open reading frame 105
  • Links
    NCBI Gene ID: 92346
    neXtProt AC: NX_O95561
    UniProt: O95561

  • Chr Location
    1q24.3; chr1:172420685-172468831 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000086277 Ensembl Gene Model | MGI Sequence Detail 37551 C57BL/6J ±  kb
    transcript ENSMUST00000162676 Ensembl | MGI Sequence Detail 983 Not Applicable  
    polypeptide ENSMUSP00000124751 Ensembl | MGI Sequence Detail 182 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • InterPro Domains
      IPR027845 Protein of unknown function DUF4548
    Molecular
    Reagents
    less
    • All nucleic 2
      cDNA 2

      Microarray probesets 2
    References
    more
    • Summaries
      All 18
      Phenotypes 6
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory