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Calml4 Gene Detail
Summary
  • Symbol
    Calml4
  • Name
    calmodulin-like 4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922850
    NCBI Gene: 75600
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:62765362-62783203 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 33.90 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    345 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922850
 protein coding gene Chr9:62765068-62783203 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034925
 protein coding gene Chr9:62430632-62445479 (+)
A/J MGP_AJ_G0034905
 protein coding gene Chr9:60366245-60377257 (+)
AKR/J MGP_AKRJ_G0034835
 protein coding gene Chr9:61772888-61783774 (+)
BALB/cJ MGP_BALBcJ_G0034898
 protein coding gene Chr9:60081425-60104471 (+)
C3H/HeJ MGP_C3HHeJ_G0034608
 protein coding gene Chr9:62276681-62287815 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035417
 protein coding gene Chr9:64148014-64168071 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032328
 protein coding gene Chr9:60018939-60029804 (+)
CAST/EiJ MGP_CASTEiJ_G0033929
 protein coding gene Chr9:62420217-62434447 (+)
CBA/J MGP_CBAJ_G0034579
 protein coding gene Chr9:66358926-66372644 (+)
DBA/2J MGP_DBA2J_G0034738
 protein coding gene Chr9:60160633-60171681 (+)
FVB/NJ MGP_FVBNJ_G0034680
 protein coding gene Chr9:59448960-59460478 (+)
LP/J MGP_LPJ_G0034821
 protein coding gene Chr9:62716807-62729634 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034723
 protein coding gene Chr9:67703493-67717757 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035439
 protein coding gene Chr9:61855497-61867455 (+)
PWK/PhJ MGP_PWKPhJ_G0033633
 protein coding gene Chr9:60286331-60297872 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033467
 protein coding gene Chr9:62128500-62139326 (+)
WSB/EiJ MGP_WSBEiJ_G0034042
 protein coding gene Chr9:61760258-61773896 (+)



Homology
more
  • Human Ortholog
    CALML4, calmodulin like 4
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CALML4, calmodulin like 4
  • Synonyms
    NY-BR-20
  • Links
    NCBI Gene ID: 91860
    neXtProt AC: NX_Q96GE6
    UniProt: Q96GE6

  • Chr Location
    15q23; chr15:68190705-68206110 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    5
  • Targeted
    3
  • Genomic Mutations
    1 involving Calml4
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    9 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    757
  • Tissues
    12
  • cDNA Data
    49
  • Literature Summary
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032246 Ensembl Gene Model | MGI Sequence Detail 17842 C57BL/6J ±  kb
transcript ENSMUST00000034777 Ensembl | MGI Sequence Detail 864 Not Applicable  
polypeptide ENSMUSP00000034777 Ensembl | MGI Sequence Detail 153 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 51
    cDNA 49
    Primer pair 2

    Microarray probesets 3
Other
Accession IDs
less
MGI:2142988
References
more
  • Summaries
    All 39
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory