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Rian Gene Detail
Summary
  • Symbol
    Rian
  • Name
    RNA imprinted and accumulated in nucleus
  • Synonyms
    5530401N18Rik, C130089L09Rik, Irm, Meg8
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1922995
    NCBI Gene: 75745
  • Alliance
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:109570379-109628150 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 12, 60.41 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    423 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922995
lncRNA gene Chr12:109570242-109628150 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015241
unclassified non-coding RNA gene Chr12:111833931-111902020 (+)
A/J MGP_AJ_G0015215
unclassified non-coding RNA gene Chr12:107526751-107586437 (+)
AKR/J MGP_AKRJ_G0015178
unclassified non-coding RNA gene Chr12:110664067-110721689 (+)
BALB/cJ MGP_BALBcJ_G0015177
unclassified non-coding RNA gene Chr12:108000248-108058088 (+)
C3H/HeJ MGP_C3HHeJ_G0015001
unclassified non-coding RNA gene Chr12:111106454-111166905 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015634
unclassified non-coding RNA gene Chr12:115252092-115313329 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013376
unclassified non-coding RNA gene Chr12:104053730-104107660 (+)
CAST/EiJ MGP_CASTEiJ_G0014554
unclassified non-coding RNA gene Chr12:106056722-106124315 (+)
CBA/J MGP_CBAJ_G0014980
unclassified non-coding RNA gene Chr12:119791299-119851329 (+)
DBA/2J MGP_DBA2J_G0015073
unclassified non-coding RNA gene Chr12:107081817-107142341 (+)
FVB/NJ MGP_FVBNJ_G0015084
unclassified non-coding RNA gene Chr12:105872531-105932450 (+)
LP/J MGP_LPJ_G0015154
unclassified non-coding RNA gene Chr12:111662550-111725890 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015111
unclassified non-coding RNA gene Chr12:122948619-123010555 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015673
unclassified non-coding RNA gene Chr12:110145639-110207421 (+)
PWK/PhJ MGP_PWKPhJ_G0014346
unclassified non-coding RNA gene Chr12:101690569-101750868 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014133
unclassified non-coding RNA gene Chr12:104315569-104372848 (+)
WSB/EiJ MGP_WSBEiJ_G0014657
unclassified non-coding RNA gene Chr12:111059711-111122875 (+)



Homology
more
  • Human Ortholog
    MEG8, maternally expressed 8, small nucleolar RNA host gene
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MEG8, maternally expressed 8, small nucleolar RNA host gene
  • Synonyms
    Bsr, Irm, LINC00024, lnc-MGC, NCRNA00024, Rian, SNHG23, SNHG24
  • Links
    NCBI Gene ID: 79104

  • Chr Location
    14q32.2-q32.31; chr14:100883057-101038859 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 75745 NCBI Gene Model | MGI Sequence Detail 57772 C57BL/6J ±  kb
transcript NR_028261 RefSeq | MGI Sequence Detail 3584 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 67
    cDNA 56
    Primer pair 10
    Other 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:3029292
References
more
  • Summaries
    All 50
    Developmental Gene Expression 28
    Gene Ontology 5
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:353308 Teng X, et al., LncRNAs in the Dlk1-Dio3 Domain Are Essential for Mid-Embryonic Heart Development. Int J Mol Sci. 2024 Jul 26;25(15)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory