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4930579G24Rik Gene Detail
Summary
  • Symbol
    4930579G24Rik
  • Name
    RIKEN cDNA 4930579G24 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923189
    NCBI Gene: 75939
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:79536386-79540127 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 34.93 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    190 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923189
 protein coding gene Chr3:79536386-79540127 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027315
 protein coding gene Chr3:79338901-79342641 (+)
A/J MGP_AJ_G0027277
 protein coding gene Chr3:76744781-76748518 (+)
AKR/J MGP_AKRJ_G0027245
 protein coding gene Chr3:78512119-78515849 (+)
BALB/cJ MGP_BALBcJ_G0027288
 protein coding gene Chr3:76773021-76776752 (+)
C3H/HeJ MGP_C3HHeJ_G0027032
 protein coding gene Chr3:78842145-78845867 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027734
 protein coding gene Chr3:82355468-82359108 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025087
 protein coding gene Chr3:72381002-72384614 (+)
CAST/EiJ MGP_CASTEiJ_G0026479
 protein coding gene Chr3:78908842-78914733 (+)
CBA/J MGP_CBAJ_G0027007
 protein coding gene Chr3:85087626-85091357 (+)
DBA/2J MGP_DBA2J_G0027143
 protein coding gene Chr3:76299139-76302843 (+)
FVB/NJ MGP_FVBNJ_G0027111
 protein coding gene Chr3:74640614-74644508 (+)
LP/J MGP_LPJ_G0027251
 protein coding gene Chr3:80306233-80309962 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027130
 protein coding gene Chr3:91335055-91341549 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027792
 protein coding gene Chr3:78350580-78354419 (+)
PWK/PhJ MGP_PWKPhJ_G0026213
 protein coding gene Chr3:76058508-76062370 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026029
 protein coding gene Chr3:77498357-77502094 (+)
WSB/EiJ MGP_WSBEiJ_G0026557
 protein coding gene Chr3:78675116-78683651 (+)



Homology
more
  • Human Ortholog
    C4orf46, chromosome 4 open reading frame 46
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C4orf46, chromosome 4 open reading frame 46
  • Synonyms
    RCDG1
  • Links
    NCBI Gene ID: 201725
    neXtProt AC: NX_Q504U0
    UniProt: Q504U0

  • Chr Location
    4q32.1; chr4:158666675-158672255 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    3
  • Gene trapped
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 4930579G24Rik
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    7 strains or lines available
Homozygous knockout does not affect male fertility or spermatogenesis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    21
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75939 NCBI Gene Model | MGI Sequence Detail 3742 C57BL/6J ±  kb
transcript NM_029482 RefSeq | MGI Sequence Detail 2004 C57BL/6  
polypeptide Q3UUX7 UniProt | EBI | MGI Sequence Detail 111 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 21
    cDNA 21

    Microarray probesets 2
References
more
  • Summaries
    All 26
    Diseases 1
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory