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Klhdc10 Gene Detail
Summary
  • Symbol
    Klhdc10
  • Name
    kelch domain containing 10
  • Synonyms
    2410127E18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924038
    NCBI Gene: 76788
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:30401867-30455178 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 12.52 cM, cytoband A3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1234 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924038
 protein coding gene Chr6:30401516-30455178 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030536
 protein coding gene Chr6:28282023-28342202 (+)
A/J MGP_AJ_G0030509
 protein coding gene Chr6:27068652-27122721 (+)
AKR/J MGP_AKRJ_G0030436
 protein coding gene Chr6:27968785-28026319 (+)
BALB/cJ MGP_BALBcJ_G0030519
 protein coding gene Chr6:27219397-27273259 (+)
C3H/HeJ MGP_C3HHeJ_G0030232
 protein coding gene Chr6:27962588-28022444 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030973
 protein coding gene Chr6:29088020-29145374 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028184
 protein coding gene Chr6:25263101-25318586 (+)
CAST/EiJ MGP_CASTEiJ_G0029634
 protein coding gene Chr6:27787615-27843814 (+)
CBA/J MGP_CBAJ_G0030210
 protein coding gene Chr6:30186221-30251229 (+)
DBA/2J MGP_DBA2J_G0030354
 protein coding gene Chr6:26997526-27051047 (+)
FVB/NJ MGP_FVBNJ_G0030308
 protein coding gene Chr6:26761860-26817707 (+)
LP/J MGP_LPJ_G0030441
 protein coding gene Chr6:28419283-28478083 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030344
 protein coding gene Chr6:32642462-32699618 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031003
 protein coding gene Chr6:27850410-27904122 (+)
PWK/PhJ MGP_PWKPhJ_G0029348
 protein coding gene Chr6:26571850-26626051 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029184
 protein coding gene Chr6:27586213-27645932 (+)
WSB/EiJ MGP_WSBEiJ_G0029710
 protein coding gene Chr6:27819362-27873019 (+)



Homology
more
  • Human Ortholog
    KLHDC10, kelch domain containing 10
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KLHDC10, kelch domain containing 10
  • Synonyms
    PNAS-138, slim
  • Links
    NCBI Gene ID: 23008
    neXtProt AC: NX_Q6PID8
    UniProt: Q6PID8, Q9BZS9

  • Chr Location
    7q32.2; chr7:130070534-130135705 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 2 alleles in 2 genetic backgrounds
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele are resistant to TNF-induced lethality and hyporthemia and show a decreased inflammatory response with reduced IL-6 production in spleen and reduced serum IL-6 levels after TNF injection.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000029775 Ensembl Gene Model | MGI Sequence Detail 53312 C57BL/6J ±  kb
    transcript ENSMUST00000068259 Ensembl | MGI Sequence Detail 5901 Not Applicable  
    polypeptide ENSMUSP00000069669 Ensembl | MGI Sequence Detail 439 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 16
      cDNA 16

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGI:2141451
    References
    more
    • Summaries
      All 37
      Gene Ontology 6
      Phenotypes 11
    • Earliest
      J:61896 Lee YJ, et al., Mit1/Lb9 and Copg2, new members of mouse imprinted genes closely linked to Peg1/Mest(1). FEBS Lett. 2000 Apr 28;472(2-3):230-4
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory