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Gpbp1l1 Gene Detail
Summary
  • Symbol
    Gpbp1l1
  • Name
    GC-rich promoter binding protein 1-like 1
  • Synonyms
    5330440M15Rik, MGC:8183
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924360
    NCBI Gene: 77110
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:116414855-116451079 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 53.22 cM, cytoband C7
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    841 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924360
 protein coding gene Chr4:116414357-116451099 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028627
 protein coding gene Chr4:117456345-117497821 (+)
A/J MGP_AJ_G0028588
 protein coding gene Chr4:112955770-112992679 (+)
AKR/J MGP_AKRJ_G0028538
 protein coding gene Chr4:115384815-115434066 (+)
BALB/cJ MGP_BALBcJ_G0028609
 protein coding gene Chr4:113580189-113617995 (+)
C3H/HeJ MGP_C3HHeJ_G0028323
 protein coding gene Chr4:116956163-117004039 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029050
 protein coding gene Chr4:122001086-122041143 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026334
 protein coding gene Chr4:106994683-107029027 (+)
CAST/EiJ MGP_CASTEiJ_G0027757
 protein coding gene Chr4:114186303-114229203 (+)
CBA/J MGP_CBAJ_G0028290
 protein coding gene Chr4:125305875-125349213 (+)
DBA/2J MGP_DBA2J_G0028438
 protein coding gene Chr4:113587389-113622214 (+)
FVB/NJ MGP_FVBNJ_G0028406
 protein coding gene Chr4:112088190-112124444 (+)
LP/J MGP_LPJ_G0028540
 protein coding gene Chr4:117664392-117703919 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028433
 protein coding gene Chr4:130294251-130340542 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029087
 protein coding gene Chr4:116544889-116581017 (+)
PWK/PhJ MGP_PWKPhJ_G0027483
 protein coding gene Chr4:110363889-110400452 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027306
 protein coding gene Chr4:112815482-112856149 (+)
WSB/EiJ MGP_WSBEiJ_G0027836
 protein coding gene Chr4:116420225-116459596 (+)



Homology
more
  • Human Ortholog
    GPBP1L1, GC-rich promoter binding protein 1 like 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GPBP1L1, GC-rich promoter binding protein 1 like 1
  • Synonyms
    SP192
  • Links
    NCBI Gene ID: 60313
    neXtProt AC: NX_Q9HC44
    UniProt: Q9HC44

  • Chr Location
    1p34.1; chr1:45627304-45688113 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    62
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034042 Ensembl Gene Model | MGI Sequence Detail 36225 C57BL/6J ±  kb
transcript ENSMUST00000030460 Ensembl | MGI Sequence Detail 3588 Not Applicable  
polypeptide ENSMUSP00000030460 Ensembl | MGI Sequence Detail 473 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 62
    cDNA 62

    Microarray probesets 4
Other
Accession IDs
less
MGI:1933129
References
more
  • Summaries
    All 42
    Gene Ontology 4
    Phenotypes 16
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory