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Tmem44 Gene Detail
Summary
  • Symbol
    Tmem44
  • Name
    transmembrane protein 44
  • Synonyms
    1700007N03Rik, 9330161C17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924489
    NCBI Gene: 224090
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:30330673-30369643 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 21.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1470 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924489
 protein coding gene Chr16:30330673-30369660 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022713
 protein coding gene Chr16:28419635-28459377 (-)
A/J MGP_AJ_G0022676
 protein coding gene Chr16:27112529-27152737 (-)
AKR/J MGP_AKRJ_G0022650
 protein coding gene Chr16:28141460-28181956 (-)
BALB/cJ MGP_BALBcJ_G0022680
 protein coding gene Chr16:27285102-27325895 (-)
C3H/HeJ MGP_C3HHeJ_G0022445
 protein coding gene Chr16:28243125-28284631 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023129
 protein coding gene Chr16:29037555-29079010 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020647
 protein coding gene Chr16:27545742-27585198 (-)
CAST/EiJ MGP_CASTEiJ_G0021973
 protein coding gene Chr16:28339352-28382292 (-)
CBA/J MGP_CBAJ_G0022415
 protein coding gene Chr16:30263226-30307320 (-)
DBA/2J MGP_DBA2J_G0022548
 protein coding gene Chr16:26987269-27027169 (-)
FVB/NJ MGP_FVBNJ_G0022523
 protein coding gene Chr16:26966633-27006767 (-)
LP/J MGP_LPJ_G0022615
 protein coding gene Chr16:28236131-28281039 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022542
 protein coding gene Chr16:29764199-29805361 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023141
 protein coding gene Chr16:28100173-28139988 (-)
PWK/PhJ MGP_PWKPhJ_G0021712
 protein coding gene Chr16:27298970-27338455 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021543
 protein coding gene Chr16:27855448-27900473 (-)
WSB/EiJ MGP_WSBEiJ_G0022017
 protein coding gene Chr16:28042225-28084997 (-)



Homology
more
  • Human Ortholog
    TMEM44, transmembrane protein 44
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM44, transmembrane protein 44
  • Links
    NCBI Gene ID: 93109
    neXtProt AC: NX_Q2T9K0
    UniProt: Q2T9K0

  • Chr Location
    3q29; chr3:194587673-194633689 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    776
  • Tissues
    10
  • cDNA Data
    51
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 224090 NCBI Gene Model | MGI Sequence Detail 38971 C57BL/6J ±  kb
transcript NM_001361297 RefSeq | MGI Sequence Detail 5250 C57BL/6  
polypeptide NP_001344343 RefSeq | MGI Sequence Detail 460 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR051415 Lysosomal/Vacuolar Amino Acid Transporter 1
Molecular
Reagents
less
  • All nucleic 51
    cDNA 51

    Microarray probesets 5
Other
Accession IDs
less
MGI:1922707
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory