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Krtap17-1 Gene Detail
Summary
  • Symbol
    Krtap17-1
  • Name
    keratin associated protein 17-1
  • Synonyms
    A030006P16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925164
    NCBI Gene: 77914
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:99884060-99884820 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 63.34 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    128 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925164
 protein coding gene Chr11:99884058-99884820 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019133
 protein coding gene Chr11:102728631-102729391 (-)
A/J MGP_AJ_G0019101
 protein coding gene Chr11:98398684-98399444 (-)
AKR/J MGP_AKRJ_G0019070
 protein coding gene Chr11:101436205-101436965 (-)
BALB/cJ MGP_BALBcJ_G0019075
 protein coding gene Chr11:98914318-98915078 (-)
C3H/HeJ MGP_C3HHeJ_G0018884
 protein coding gene Chr11:101634199-101634959 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019524
 protein coding gene Chr11:105880069-105880829 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017151
 protein coding gene Chr11:95851147-95851914 (-)
CAST/EiJ MGP_CASTEiJ_G0018438
 protein coding gene Chr11:102610713-102611473 (-)
CBA/J MGP_CBAJ_G0018853
 protein coding gene Chr11:110325049-110325809 (-)
DBA/2J MGP_DBA2J_G0018966
 protein coding gene Chr11:97963517-97964277 (-)
FVB/NJ MGP_FVBNJ_G0018955
 protein coding gene Chr11:97470829-97471589 (-)
LP/J MGP_LPJ_G0019035
 protein coding gene Chr11:103255817-103256577 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018986
 protein coding gene Chr11:109954210-109954970 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019562
 protein coding gene Chr11:101812373-101813133 (-)
PWK/PhJ MGP_PWKPhJ_G0018204
 protein coding gene Chr11:99001109-99001869 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017993
 protein coding gene Chr11:101505216-101505973 (-)
WSB/EiJ MGP_WSBEiJ_G0018488
 protein coding gene Chr11:101780547-101781307 (-)



Homology
more
  • Human Ortholog
    KRTAP17-1, keratin associated protein 17-1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP17-1, keratin associated protein 17-1
  • Synonyms
    KAP17.1, KRTAP16.1, KRTAP17.1
  • Links
    NCBI Gene ID: 83902
    neXtProt AC: NX_Q9BYP8
    UniProt: Q9BYP8

  • Chr Location
    17q21.2; chr17:41314912-41315710 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    737
  • Tissues
    12
  • cDNA Data
    4
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000078252 Ensembl Gene Model | MGI Sequence Detail 761 C57BL/6J ±  kb
    transcript ENSMUST00000105049 Ensembl | MGI Sequence Detail 761 Not Applicable  
    polypeptide ENSMUSP00000100670 Ensembl | MGI Sequence Detail 109 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    Molecular
    Reagents
    less
    • All nucleic 5
      cDNA 4
      Primer pair 1

      Microarray probesets 3
    References
    more
    • Summaries
      All 30
      Developmental Gene Expression 2
      Phenotypes 11
    • Earliest
      J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory