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Tcerg1 Gene Detail
Summary
  • Symbol
    Tcerg1
  • Name
    transcription elongation regulator 1 (CA150)
  • Synonyms
    2410022J09Rik, 2900090C16Rik, ca150, Fbp28, p144, Taf2s
  • Feature Type
    protein coding gene
  • IDs
    MGI:1926421
    NCBI Gene: 56070
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:42644552-42708858 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 22.66 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1490 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1926421
 protein coding gene Chr18:42644369-42708858 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024381
 protein coding gene Chr18:41144275-41216686 (+)
A/J MGP_AJ_G0024348
 protein coding gene Chr18:39722656-39789230 (+)
AKR/J MGP_AKRJ_G0024317
 protein coding gene Chr18:40818453-40887120 (+)
BALB/cJ MGP_BALBcJ_G0024348
 protein coding gene Chr18:39810482-39875604 (+)
C3H/HeJ MGP_C3HHeJ_G0024114
 protein coding gene Chr18:40866990-40942312 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024790
 protein coding gene Chr18:42615171-42689502 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022228
 protein coding gene Chr18:39549127-39610179 (+)
CAST/EiJ MGP_CASTEiJ_G0023589
 protein coding gene Chr18:40834585-40906016 (+)
CBA/J MGP_CBAJ_G0024084
 protein coding gene Chr18:43885836-43960991 (+)
DBA/2J MGP_DBA2J_G0024214
 protein coding gene Chr18:39312625-39377094 (+)
FVB/NJ MGP_FVBNJ_G0024180
 protein coding gene Chr18:38942337-39006039 (+)
LP/J MGP_LPJ_G0024298
 protein coding gene Chr18:41219681-41285783 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024211
 protein coding gene Chr18:45136756-45212295 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024839
 protein coding gene Chr18:40695558-40761182 (+)
PWK/PhJ MGP_PWKPhJ_G0023333
 protein coding gene Chr18:39533693-39596789 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023138
 protein coding gene Chr18:40931952-40997317 (+)
WSB/EiJ MGP_WSBEiJ_G0023652
 protein coding gene Chr18:40605345-40678104 (+)



Homology
more
  • Human Ortholog
    TCERG1, transcription elongation regulator 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TCERG1, transcription elongation regulator 1
  • Synonyms
    CA150, TAF2S, Urn1
  • Links
    NCBI Gene ID: 10915
    neXtProt AC: NX_O14776
    UniProt: O14776

  • Chr Location
    5q32; chr5:146447311-146511961 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    19
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    719
  • Tissues
    13
  • cDNA Data
    164
  • Literature Summary
    5
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024498 Ensembl Gene Model | MGI Sequence Detail 64307 C57BL/6J ±  kb
transcript ENSMUST00000237602 Ensembl | MGI Sequence Detail 4417 Not Applicable  
polypeptide ENSMUSP00000158288 Ensembl | MGI Sequence Detail 1100 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 169
    cDNA 166
    Primer pair 1
    Other 2

    Microarray probesets 5
Other
Accession IDs
less
MGI:1924016, MGI:1924089, MGI:2147223
References
more
  • Summaries
    All 45
    Developmental Gene Expression 5
    Gene Ontology 7
    Phenotypes 8
  • Earliest
    J:38792 Chan DC, et al., Formin binding proteins bear WWP/WW domains that bind proline-rich peptides and functionally resemble SH3 domains. EMBO J. 1996 Mar 1;15(5):1045-54
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory