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Tfip11 Gene Detail
Summary
  • Symbol
    Tfip11
  • Name
    tuftelin interacting protein 11
  • Synonyms
    Tip39
  • Feature Type
    protein coding gene
  • IDs
    MGI:1930075
    NCBI Gene: 54723
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:112474235-112485939 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 54.69 cM, cytoband F
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    376 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1930075
 protein coding gene Chr5:112474224-112485939 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029903
 protein coding gene Chr5:114903253-114914914 (+)
A/J MGP_AJ_G0029869
 protein coding gene Chr5:110430198-110441949 (+)
AKR/J MGP_AKRJ_G0029807
 protein coding gene Chr5:113937348-113949007 (+)
BALB/cJ MGP_BALBcJ_G0029880
 protein coding gene Chr5:111790702-111802361 (+)
C3H/HeJ MGP_C3HHeJ_G0029600
 protein coding gene Chr5:114380600-114392261 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030333
 protein coding gene Chr5:119396314-119408026 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027562
 protein coding gene Chr5:105252709-105264746 (+)
CAST/EiJ MGP_CASTEiJ_G0029008
 protein coding gene Chr5:113282791-113294417 (+)
CBA/J MGP_CBAJ_G0029567
 protein coding gene Chr5:123879233-123890893 (+)
DBA/2J MGP_DBA2J_G0029717
 protein coding gene Chr5:110498000-110509661 (+)
FVB/NJ MGP_FVBNJ_G0029674
 protein coding gene Chr5:109221299-109232960 (+)
LP/J MGP_LPJ_G0029805
 protein coding gene Chr5:115470435-115482097 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029705
 protein coding gene Chr5:128449960-128461622 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030374
 protein coding gene Chr5:113370200-113381943 (+)
PWK/PhJ MGP_PWKPhJ_G0028722
 protein coding gene Chr5:109105862-109117679 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028560
 protein coding gene Chr5:110855694-110867358 (+)
WSB/EiJ MGP_WSBEiJ_G0029084
 protein coding gene Chr5:113888466-113900133 (+)



Homology
more
  • Human Ortholog
    TFIP11, tuftelin interacting protein 11
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TFIP11, tuftelin interacting protein 11
  • Synonyms
    bK445C9.6, NTR1, Spp382, STIP, STIP-1, TIP39
  • Links
    NCBI Gene ID: 24144
    neXtProt AC: NX_Q9UBB9
    UniProt: Q9UBB9

  • Chr Location
    22q12.1; chr22:26491225-26512505 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    28
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    886
  • Tissues
    45
  • cDNA Data
    11
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 54723 NCBI Gene Model | MGI Sequence Detail 11705 C57BL/6J ±  kb
transcript NM_018783 RefSeq | MGI Sequence Detail 3549 C57BL/6  
polypeptide Q9ERA6 UniProt | EBI | MGI Sequence Detail 838 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2140799, MGI:2141127
References
more
  • Summaries
    All 44
    Developmental Gene Expression 4
    Gene Ontology 11
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory