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Fsd1 Gene Detail
Summary
  • Symbol
    Fsd1
  • Name
    fibronectin type 3 and SPRY domain-containing protein
  • Synonyms
    MGC:58341
  • Feature Type
    protein coding gene
  • IDs
    MGI:1934858
    NCBI Gene: 240121
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:56293509-56303881 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 29.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    323 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1934858
 protein coding gene Chr17:56293475-56303881 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023905
 protein coding gene Chr17:57607359-57617678 (+)
A/J MGP_AJ_G0023865
 protein coding gene Chr17:56057703-56068072 (+)
AKR/J MGP_AKRJ_G0023834
 protein coding gene Chr17:56742065-56752411 (+)
BALB/cJ MGP_BALBcJ_G0023866
 protein coding gene Chr17:55892303-55903051 (+)
C3H/HeJ MGP_C3HHeJ_G0023629
 protein coding gene Chr17:57449105-57459458 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024310
 protein coding gene Chr17:59890589-59901978 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021757
 protein coding gene Chr17:52576228-52586057 (+)
CAST/EiJ MGP_CASTEiJ_G0023112
 protein coding gene Chr17:57753581-57763713 (+)
CBA/J MGP_CBAJ_G0023606
 protein coding gene Chr17:62184528-62199153 (+)
DBA/2J MGP_DBA2J_G0023734
 protein coding gene Chr17:54791809-54802350 (+)
FVB/NJ MGP_FVBNJ_G0023700
 protein coding gene Chr17:54307162-54317664 (+)
LP/J MGP_LPJ_G0023814
 protein coding gene Chr17:58331935-58342267 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023727
 protein coding gene Chr17:61757730-61768076 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024355
 protein coding gene Chr17:57116500-57127095 (+)
PWK/PhJ MGP_PWKPhJ_G0022857
 protein coding gene Chr17:54133867-54144001 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022669
 protein coding gene Chr17:53878683-53890172 (+)
WSB/EiJ MGP_WSBEiJ_G0023176
 protein coding gene Chr17:57728160-57738457 (+)



Homology
more
  • Human Ortholog
    FSD1, fibronectin type III and SPRY domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FSD1, fibronectin type III and SPRY domain containing 1
  • Synonyms
    GLFND, MIR1
  • Links
    NCBI Gene ID: 79187
    neXtProt AC: NX_Q9BTV5
    UniProt: Q9BTV5

  • Chr Location
    19p13.3; chr19:4304598-4323843 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    23
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    806
  • Tissues
    14
  • cDNA Data
    17
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000011589 Ensembl Gene Model | MGI Sequence Detail 10373 C57BL/6J ±  kb
transcript ENSMUST00000011733 Ensembl | MGI Sequence Detail 1748 Not Applicable  
polypeptide ENSMUSP00000011733 Ensembl | MGI Sequence Detail 496 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    Genomic 1
    cDNA 17

    Microarray probesets 1
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:68337 Carim-Todd L, et al., Characterization of human FSD1, a novel brain specific gene on chromosome 19 with paralogy to 9q31. Biochim Biophys Acta. 2001 Mar 19;1518(1-2):200-3
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory