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Pramel29 Gene Detail
Summary
  • Symbol
    Pramel29
  • Name
    PRAME like 29
  • Synonyms
    C87977
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140708
    NCBI Gene: 97187
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:143933332-143939587 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 77.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140708
 protein coding gene Chr4:143933332-143939660 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029076
 protein coding gene Chr4:147069700-147081476 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0019930
 protein coding gene Chr12:86165449-86177481 (-)
C3H/HeJ MGP_C3HHeJ_G0028782
 protein coding gene Chr4:145606951-145613257 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029513
 protein coding gene Chr4:152497990-152503221 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026766
 protein coding gene Chr4:133717965-133724428 (+)
CAST/EiJ MGP_CASTEiJ_G0028203
 protein coding gene Chr4:143777008-143782334 (-)
CBA/J MGP_CBAJ_G0028744
 protein coding gene Chr4:157178035-157214583 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0028991
 protein coding gene Chr4:147585102-147591360 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0029546
 protein coding gene Chr4:145692992-145703260 (-)
PWK/PhJ MGP_PWKPhJ_G0015131
 protein coding gene Chr1:42670729-42671704 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014913
 protein coding gene Chr1:44444680-44445653 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 97187 NCBI Gene Model | MGI Sequence Detail 6256 C57BL/6J ±  kb
transcript NM_001177542 RefSeq | MGI Sequence Detail 1826 C57BL/6  
polypeptide NP_001171013 RefSeq | MGI Sequence Detail 498 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME
    IPR050694 PRAME domain-containing protein
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:2140699, MGI:6430525
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory