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Slc35e4 Gene Detail
Summary
  • Symbol
    Slc35e4
  • Name
    solute carrier family 35, member E4
  • Synonyms
    A330108F03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2144150
    NCBI Gene: 103710
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:3857022-3864664 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 2.75 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    195 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2144150
 protein coding gene Chr11:3857021-3864664 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017966
 protein coding gene Chr11:818294-826502 (-)
A/J MGP_AJ_G0017939
 protein coding gene Chr11:840168-847811 (-)
AKR/J MGP_AKRJ_G0017903
 protein coding gene Chr11:869168-876811 (-)
BALB/cJ MGP_BALBcJ_G0017907
 protein coding gene Chr11:804776-812419 (-)
C3H/HeJ MGP_C3HHeJ_G0017720
 protein coding gene Chr11:795983-803626 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018360
 protein coding gene Chr11:892191-899834 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016019
 protein coding gene Chr11:736701-744193 (-)
CAST/EiJ MGP_CASTEiJ_G0017282
 protein coding gene Chr11:765962-775293 (-)
CBA/J MGP_CBAJ_G0017695
 protein coding gene Chr11:1096301-1103944 (-)
DBA/2J MGP_DBA2J_G0017806
 protein coding gene Chr11:746380-754023 (-)
FVB/NJ MGP_FVBNJ_G0017797
 protein coding gene Chr11:783221-791304 (-)
LP/J MGP_LPJ_G0017876
 protein coding gene Chr11:900104-908887 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017823
 protein coding gene Chr11:801838-809481 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018399
 protein coding gene Chr11:886300-894031 (-)
PWK/PhJ MGP_PWKPhJ_G0017063
 protein coding gene Chr11:739579-747300 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016859
 protein coding gene Chr11:843594-852530 (-)
WSB/EiJ MGP_WSBEiJ_G0017336
 protein coding gene Chr11:768182-775825 (-)



Homology
more
  • Human Ortholog
    SLC35E4, solute carrier family 35 member E4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC35E4, solute carrier family 35 member E4
  • Links
    NCBI Gene ID: 339665
    neXtProt AC: NX_Q6ICL7
    UniProt: Q6ICL7

  • Chr Location
    22q12.2; chr22:30635781-30669019 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    882
  • Tissues
    102
  • cDNA Data
    43
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 103710 NCBI Gene Model | MGI Sequence Detail 7643 C57BL/6J ±  kb
transcript NM_153142 RefSeq | MGI Sequence Detail 3059 C57BL/6  
polypeptide Q8K3D6 UniProt | EBI | MGI Sequence Detail 351 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 43
    cDNA 43

    Microarray probesets 5
Other
Accession IDs
less
MGI:2144218
References
more
  • Summaries
    All 23
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory