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Fam117a Gene Detail
Summary
  • Symbol
    Fam117a
  • Name
    family with sequence similarity 117, member A
  • Synonyms
    5730593F17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2144564
    NCBI Gene: 215512
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:95227844-95272698 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 59.01 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1007 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2144564
 protein coding gene Chr11:95227844-95272698 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018981
 protein coding gene Chr11:97528147-97574649 (+)
A/J MGP_AJ_G0018949
 protein coding gene Chr11:93600533-93645839 (+)
AKR/J MGP_AKRJ_G0018919
 protein coding gene Chr11:96498748-96543449 (+)
BALB/cJ MGP_BALBcJ_G0018922
 protein coding gene Chr11:94070863-94116071 (+)
C3H/HeJ MGP_C3HHeJ_G0018736
 protein coding gene Chr11:96615495-96664473 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019374
 protein coding gene Chr11:100598514-100644343 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017005
 protein coding gene Chr11:91084129-91129544 (+)
CAST/EiJ MGP_CASTEiJ_G0018290
 protein coding gene Chr11:97419234-97467102 (+)
CBA/J MGP_CBAJ_G0018707
 protein coding gene Chr11:104702307-104752525 (+)
DBA/2J MGP_DBA2J_G0018815
 protein coding gene Chr11:93171071-93215934 (+)
FVB/NJ MGP_FVBNJ_G0018804
 protein coding gene Chr11:92640583-92685947 (+)
LP/J MGP_LPJ_G0018885
 protein coding gene Chr11:98102881-98148799 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018831
 protein coding gene Chr11:104745359-104790955 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019414
 protein coding gene Chr11:96759873-96805701 (+)
PWK/PhJ MGP_PWKPhJ_G0018061
 protein coding gene Chr11:94095961-94143411 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017850
 protein coding gene Chr11:96435710-96484528 (+)
WSB/EiJ MGP_WSBEiJ_G0018339
 protein coding gene Chr11:96678051-96725926 (+)



Homology
more
  • Human Ortholog
    FAM117A, family with sequence similarity 117 member A
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM117A, family with sequence similarity 117 member A
  • Links
    NCBI Gene ID: 81558
    neXtProt AC: NX_Q9C073
    UniProt: Q9C073

  • Chr Location
    17q21.33; chr17:49710332-49789180 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    2
  • cDNA Data
    39
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 215512 NCBI Gene Model | MGI Sequence Detail 44855 C57BL/6J ±  kb
transcript NM_172543 RefSeq | MGI Sequence Detail 2334 C57BL/6  
polypeptide Q7TNF9 UniProt | EBI | MGI Sequence Detail 451 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 40
    cDNA 39
    Other 1

    Microarray probesets 3
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Phenotypes 14
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory