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Fam8a1 Gene Detail
Summary
  • Symbol
    Fam8a1
  • Name
    family with sequence similarity 8, member A1
  • Synonyms
    C78339
  • Feature Type
    protein coding gene
  • IDs
    MGI:2145496
    NCBI Gene: 97863
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:46822998-46831532 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 24.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    190 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2145496
 protein coding gene Chr13:46822953-46831540 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020514
 protein coding gene Chr13:45442340-45452997 (+)
A/J MGP_AJ_G0020468
 protein coding gene Chr13:43870030-43878972 (+)
AKR/J MGP_AKRJ_G0020445
 protein coding gene Chr13:45075586-45083602 (+)
BALB/cJ MGP_BALBcJ_G0020464
 protein coding gene Chr13:44077365-44086112 (+)
C3H/HeJ MGP_C3HHeJ_G0020263
 protein coding gene Chr13:44942224-44951988 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020897
 protein coding gene Chr13:46829721-46838757 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0019778
 protein coding gene Chr13:44871188-44879725 (+)
CBA/J MGP_CBAJ_G0020224
 protein coding gene Chr13:48778365-48788490 (+)
DBA/2J MGP_DBA2J_G0020346
 protein coding gene Chr13:43427789-43436323 (+)
FVB/NJ MGP_FVBNJ_G0020325
 protein coding gene Chr13:42944222-42952792 (+)
LP/J MGP_LPJ_G0020421
 protein coding gene Chr13:45677324-45683455 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020354
 protein coding gene Chr13:48600872-48609971 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020940
 protein coding gene Chr13:44755726-44764574 (+)
PWK/PhJ MGP_PWKPhJ_G0019534
 protein coding gene Chr13:43552734-43561707 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019362
 protein coding gene Chr13:43426798-43435386 (+)
WSB/EiJ MGP_WSBEiJ_G0019840
 protein coding gene Chr13:45086932-45096210 (+)



Homology
more
  • Human Ortholog
    FAM8A1, family with sequence similarity 8 member A1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM8A1, family with sequence similarity 8 member A1
  • Synonyms
    AHCP
  • Links
    NCBI Gene ID: 51439
    neXtProt AC: NX_Q9UBU6
    UniProt: Q9UBU6

  • Chr Location
    6p22.3; chr6:17600302-17611719 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    132
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000069237 Ensembl Gene Model | MGI Sequence Detail 8535 C57BL/6J ±  kb
transcript ENSMUST00000099547 Ensembl | MGI Sequence Detail 3664 Not Applicable  
polypeptide ENSMUSP00000097144 Ensembl | MGI Sequence Detail 399 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 132
    cDNA 132

    Microarray probesets 5
References
more
  • Summaries
    All 31
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory