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Radx Gene Detail
Summary
  • Symbol
    Radx
  • Name
    RPA1 related single stranded DNA binding protein, X-linked
  • Synonyms
    D330045A20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2147848
    NCBI Gene: 102871
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:138381116-138455331 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 61.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1461 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2147848
 protein coding gene ChrX:138381116-138455333 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036123
 protein coding gene ChrX:136972421-137053032 (+)
A/J MGP_AJ_G0036102
 protein coding gene ChrX:136357640-136434191 (+)
AKR/J MGP_AKRJ_G0036026
 protein coding gene ChrX:140747856-140825856 (+)
BALB/cJ MGP_BALBcJ_G0036091
 protein coding gene ChrX:134715033-134791726 (+)
C3H/HeJ MGP_C3HHeJ_G0035800
 protein coding gene ChrX:136996579-137073983 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036616
 protein coding gene ChrX:141018313-141092375 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033441
 protein coding gene ChrX:128127990-128200644 (+)
CAST/EiJ MGP_CASTEiJ_G0035091
 protein coding gene ChrX:117811376-117897198 (+)
CBA/J MGP_CBAJ_G0035777
 protein coding gene ChrX:145275403-145392752 (+)
DBA/2J MGP_DBA2J_G0035934
 protein coding gene ChrX:135551117-135625388 (+)
FVB/NJ MGP_FVBNJ_G0035868
 protein coding gene ChrX:134780030-134857736 (+)
LP/J MGP_LPJ_G0036026
 protein coding gene ChrX:137954324-138030307 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035905
 protein coding gene ChrX:152833959-152916487 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036652
 protein coding gene ChrX:136297193-136371798 (+)
PWK/PhJ MGP_PWKPhJ_G0034784
 protein coding gene ChrX:114741134-114816242 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034611
 protein coding gene ChrX:118344474-118420180 (+)
WSB/EiJ MGP_WSBEiJ_G0035226
 protein coding gene ChrX:134602854-134698661 (+)



Homology
more
  • Human Ortholog
    RADX, RPA1 related single stranded DNA binding protein, X-linked
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RADX, RPA1 related single stranded DNA binding protein, X-linked
  • Synonyms
    CXorf57
  • Links
    NCBI Gene ID: 55086
    neXtProt AC: NX_Q6NSI4
    UniProt: Q6NSI4

  • Chr Location
    Xq22.3; chrX:106611930-106679439 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    709
  • Tissues
    1
  • cDNA Data
    10
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042498 Ensembl Gene Model | MGI Sequence Detail 74216 C57BL/6J ±  kb
transcript ENSMUST00000113030 Ensembl | MGI Sequence Detail 3736 Not Applicable  
polypeptide ENSMUSP00000108653 Ensembl | MGI Sequence Detail 850 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 10
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:6277139
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:282332 Okamura E, et al., Esrrb function is required for proper primordial germ cell development in presomite stage mouse embryos. Dev Biol. 2019 Nov 15;455(2):382-392
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory