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Rfpl4 Gene Detail
Summary
  • Symbol
    Rfpl4
  • Name
    ret finger protein-like 4
  • Synonyms
    D7Ertd486e
  • Feature Type
    protein coding gene
  • IDs
    MGI:2149590
    NCBI Gene: 192658
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:5112786-5119910 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 2.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    275 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2149590
 protein coding gene Chr7:5112786-5119949 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031585
 protein coding gene Chr7:2084492-2091617 (-)
A/J MGP_AJ_G0031559
 protein coding gene Chr7:2073981-2081087 (-)
AKR/J MGP_AKRJ_G0031488
 protein coding gene Chr7:2150225-2157807 (-)
BALB/cJ MGP_BALBcJ_G0031567
 protein coding gene Chr7:2124235-2131159 (-)
C3H/HeJ MGP_C3HHeJ_G0031288
 protein coding gene Chr7:2129011-2136148 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032028
 protein coding gene Chr7:2160096-2167205 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029152
 protein coding gene Chr7:1786631-1787795 (-)
CAST/EiJ MGP_CASTEiJ_G0030652
 protein coding gene Chr7:2068401-2076440 (-)
CBA/J MGP_CBAJ_G0031246
 protein coding gene Chr7:2357462-2364588 (-)
DBA/2J MGP_DBA2J_G0031405
 protein coding gene Chr7:2059619-2067068 (-)
FVB/NJ MGP_FVBNJ_G0031357
 protein coding gene Chr7:1999344-2006463 (-)
LP/J MGP_LPJ_G0031490
 protein coding gene Chr7:2173716-2180834 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031396
 protein coding gene Chr7:2312802-2321239 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032058
 protein coding gene Chr7:2054716-2061637 (-)
PWK/PhJ MGP_PWKPhJ_G0030380
 protein coding gene Chr7:2209530-2216789 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030205
 protein coding gene Chr7:2099722-2110404 (-)
WSB/EiJ MGP_WSBEiJ_G0030747
 protein coding gene Chr7:2065934-2073074 (-)



Homology
more
  • Human Ortholog
    RFPL1, ret finger protein like 1
  • Vertebrate Orthologs
    7
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RFPL1, ret finger protein like 1
  • Synonyms
    RNF78
  • Links
    NCBI Gene ID: 5988
    neXtProt AC: NX_O75677
    UniProt: O75677

  • Chr Location
    22q12.2; chr22:29387909-29442455 (+)  GRCh38
  • Human Ortholog
    RFPL2, ret finger protein like 2
  • Synonyms
    RNF79
  • Links
    NCBI Gene ID: 10739
    neXtProt AC: NX_O75678
    UniProt: O75678

  • Chr Location
    22q12.3; chr22:32190435-32205073 (-)  GRCh38
  • Human Ortholog
    RFPL3, ret finger protein like 3
  • Synonyms
    RNF120
  • Links
    NCBI Gene ID: 10738
    neXtProt AC: NX_O75679
    UniProt: O75679

  • Chr Location
    22q12.3; chr22:32354885-32361161 (+)  GRCh38
  • Human Ortholog
    RFPL4A, ret finger protein like 4A
  • Synonyms
    RFPL4, RNF210
  • Links
    NCBI Gene ID: 342931
    neXtProt AC: NX_A6NLU0
    UniProt: A6NLU0

  • Chr Location
    19q13.42
  • Human Ortholog
    RFPL4AL1, ret finger protein like 4A like 1
  • Synonyms
    RNF210B
  • Links
    NCBI Gene ID: 729974
    neXtProt AC: NX_F8VTS6
    UniProt: F8VTS6

  • Chr Location
    19q13.42; chr19:55769118-55773420 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    735
  • Tissues
    29
  • cDNA Data
    11
  • Literature Summary
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 192658 NCBI Gene Model | MGI Sequence Detail 7125 C57BL/6J ±  kb
transcript NM_138954 RefSeq | MGI Sequence Detail 1677 ZRU/MplStud  
polypeptide Q8VH31 UniProt | EBI | MGI Sequence Detail 287 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    Genomic 2
    cDNA 11
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1261915
References
more
  • Summaries
    All 29
    Developmental Gene Expression 7
    Gene Ontology 4
    Phenotypes 2
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:282136 Kato Y, et al., ELAVL2-directed RNA regulatory network drives the formation of quiescent primordial follicles. EMBO Rep. 2019 Dec 5;20(12):e48251
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory