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Cd300c2 Gene Detail
Summary
  • Symbol
    Cd300c2
  • Name
    CD300C molecule 2
  • Synonyms
    AF251705, Cd300d, Clm4, DIgR1, Igsf7, LMIR2, MAIR-II
  • Feature Type
    protein coding gene
  • IDs
    MGI:2153249
    NCBI Gene: 140497
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:114887595-114892706 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 80.57 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    336 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2153249
 protein coding gene Chr11:114887547-114895058 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019368
 protein coding gene Chr11:118975500-118982469 (-)
A/J MGP_AJ_G0019336
 protein coding gene Chr11:113790171-113796731 (-)
AKR/J MGP_AKRJ_G0019304
 protein coding gene Chr11:117173102-117189062 (-)
BALB/cJ MGP_BALBcJ_G0019311
 protein coding gene Chr11:114199702-114207309 (-)
C3H/HeJ MGP_C3HHeJ_G0019118
 protein coding gene Chr11:117527912-117533132 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019760
 protein coding gene Chr11:122537019-122542900 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017380
 protein coding gene Chr11:110743855-110747898 (+)
CAST/EiJ MGP_CASTEiJ_G0018672
 protein coding gene Chr11:118848257-118856710 (-)
CBA/J MGP_CBAJ_G0019088
 protein coding gene Chr11:127461202-127466404 (-)
DBA/2J MGP_DBA2J_G0019200
 protein coding gene Chr11:113223262-113235685 (-)
FVB/NJ MGP_FVBNJ_G0019191
 protein coding gene Chr11:112736980-112741716 (-)
LP/J MGP_LPJ_G0019271
 protein coding gene Chr11:119373010-119378539 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019223
 protein coding gene Chr11:126597156-126619883 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019797
 protein coding gene Chr11:117835826-117843315 (-)
PWK/PhJ MGP_PWKPhJ_G0018437
 protein coding gene Chr11:114532065-114537555 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018228
 protein coding gene Chr11:117638682-117643368 (-)
WSB/EiJ MGP_WSBEiJ_G0018725
 protein coding gene Chr11:117789005-117799244 (-)



Homology
more
  • Human Ortholog
    CD300C, CD300c molecule
  • Vertebrate Orthologs
    7
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CD300C, CD300c molecule
  • Synonyms
    CLM-6, CMRF-35, CMRF35, CMRF-35A, CMRF35A, CMRF35-A1, CMRF35A1, IGSF16, LIR
  • Links
    NCBI Gene ID: 10871
    neXtProt AC: NX_Q08708
    UniProt: Q08708

  • Chr Location
    17q25.1; chr17:74534635-74546115 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit increased stimulated B cell proliferation.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    17
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 140497 NCBI Gene Model | MGI Sequence Detail 5112 C57BL/6J ±  kb
transcript NM_134158 RefSeq | MGI Sequence Detail 933 C57BL/6  
polypeptide Q7TSN2 UniProt | EBI | MGI Sequence Detail 228 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 3
References
more
  • Summaries
    All 32
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:71672 Luo K, et al., DIgR1, a novel membrane receptor of the immunoglobulin gene superfamily, is preferentially expressed by antigen-presenting cells. Biochem Biophys Res Commun. 2001 Sep 14;287(1):35-41
  • Latest
    J:282070 Nakazawa Y, et al., Cutting Edge: Involvement of the Immunoreceptor CD300c2 on Alveolar Macrophages in Bleomycin-Induced Lung Fibrosis. J Immunol. 2019 Dec 15;203(12):3107-3111
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory