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Trpv3 Gene Detail
Summary
  • Symbol
    Trpv3
  • Name
    transient receptor potential cation channel, subfamily V, member 3
  • Synonyms
    1110036I10Rik, Nh, VRL3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2181407
    NCBI Gene: 246788
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:73158315-73191194 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 45.25 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    161 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2181407
 protein coding gene Chr11:73158214-73191194 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018659
 protein coding gene Chr11:73950250-73983186 (+)
A/J MGP_AJ_G0018627
 protein coding gene Chr11:71179296-71212610 (+)
AKR/J MGP_AKRJ_G0018596
 protein coding gene Chr11:73355645-73388597 (+)
BALB/cJ MGP_BALBcJ_G0018599
 protein coding gene Chr11:71479148-71512809 (+)
C3H/HeJ MGP_C3HHeJ_G0018412
 protein coding gene Chr11:73302027-73337608 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019050
 protein coding gene Chr11:76201582-76236545 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016693
 protein coding gene Chr11:67983800-68019852 (+)
CAST/EiJ MGP_CASTEiJ_G0017967
 protein coding gene Chr11:73690710-73725266 (+)
CBA/J MGP_CBAJ_G0018384
 protein coding gene Chr11:79555985-79594732 (+)
DBA/2J MGP_DBA2J_G0018493
 protein coding gene Chr11:70803010-70836339 (+)
FVB/NJ MGP_FVBNJ_G0018484
 protein coding gene Chr11:70350525-70383481 (+)
LP/J MGP_LPJ_G0018564
 protein coding gene Chr11:74466920-74501254 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018507
 protein coding gene Chr11:80068266-80102792 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019092
 protein coding gene Chr11:73531233-73564979 (+)
PWK/PhJ MGP_PWKPhJ_G0017740
 protein coding gene Chr11:71449285-71482729 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017530
 protein coding gene Chr11:73252607-73286630 (+)
WSB/EiJ MGP_WSBEiJ_G0018021
 protein coding gene Chr11:73289348-73326303 (+)



Homology
more
  • Human Ortholog
    TRPV3, transient receptor potential cation channel subfamily V member 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRPV3, transient receptor potential cation channel subfamily V member 3
  • Synonyms
    FNEPPK2, OLMS, OLMS1, VRL3
  • Links
    NCBI Gene ID: 162514
    neXtProt AC: NX_Q8NET8
    UniProt: Q8NET8

  • Chr Location
    17p13.2; chr17:3510502-3557812 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with Trpv3 mouse models; 6 with human TRPV3 associations

Human Disease Mouse Models
      
IDs
 View 1 model
      
IDs
IDs
IDs
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    15 phenotypes from 4 alleles in 5 genetic backgrounds
    44 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous null mice have strong deficits in response to innocuous and noxious heat but not in other sensory modalities.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    26
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    756
  • Tissues
    33
  • cDNA Data
    4
  • Literature Summary
    8
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 246788 NCBI Gene Model | MGI Sequence Detail 32880 C57BL/6J ±  kb
    transcript NM_145099 RefSeq | MGI Sequence Detail 5708 ZRU/MplStud  
    polypeptide Q8K424 UniProt | EBI | MGI Sequence Detail 791 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 5
      cDNA 4
      Primer pair 1

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:1915950, MGI:2144247, MGI:2384169
    References
    more
    • Summaries
      All 92
      Developmental Gene Expression 8
      Diseases 1
      Gene Ontology 10
      Phenotypes 44
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:347309 Akizawa H, et al., Zn(2+) is essential for Ca(2+) oscillations in mouse eggs. Elife. 2023 Dec 15;12
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/05/2024
    MGI 6.24     		The Jackson Laboratory