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Map7d1 Gene Detail
Summary
  • Symbol
    Map7d1
  • Name
    MAP7 domain containing 1
  • Synonyms
    MGC:27585, MGC:28498, Mtap7d1, Parcc1, Rprc1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384297
    NCBI Gene: 245877
  • Alliance
    gene page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:126125960-126150112 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 60.16 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    589 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384297
 protein coding gene Chr4:126125960-126150136 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028775
 protein coding gene Chr4:127901172-127926951 (-)
A/J MGP_AJ_G0028734
 protein coding gene Chr4:122867111-122892372 (-)
AKR/J MGP_AKRJ_G0028687
 protein coding gene Chr4:126247110-126271276 (-)
BALB/cJ MGP_BALBcJ_G0028757
 protein coding gene Chr4:123443972-123469598 (-)
C3H/HeJ MGP_C3HHeJ_G0028471
 protein coding gene Chr4:126309898-126335011 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029199
 protein coding gene Chr4:132789228-132814833 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026472
 protein coding gene Chr4:116012743-116037220 (-)
CAST/EiJ MGP_CASTEiJ_G0027904
 protein coding gene Chr4:124413014-124441472 (-)
CBA/J MGP_CBAJ_G0028437
 protein coding gene Chr4:135993550-136021728 (-)
DBA/2J MGP_DBA2J_G0028586
 protein coding gene Chr4:123322147-123346533 (-)
FVB/NJ MGP_FVBNJ_G0028553
 protein coding gene Chr4:121974767-122000227 (-)
LP/J MGP_LPJ_G0028687
 protein coding gene Chr4:128186919-128213824 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028579
 protein coding gene Chr4:141020250-141050016 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029237
 protein coding gene Chr4:126597633-126622831 (-)
PWK/PhJ MGP_PWKPhJ_G0027625
 protein coding gene Chr4:119800505-119826816 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027451
 protein coding gene Chr4:122422581-122446865 (-)
WSB/EiJ MGP_WSBEiJ_G0027984
 protein coding gene Chr4:126696242-126723842 (-)



Homology
more
  • Human Ortholog
    MAP7D1, MAP7 domain containing 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MAP7D1, MAP7 domain containing 1
  • Synonyms
    PARCC1, RPRC1
  • Links
    NCBI Gene ID: 55700
    neXtProt AC: NX_Q3KQU3
    UniProt: Q3KQU3

  • Chr Location
    1p34.3; chr1:36155579-36180849 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    22
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    3
  • Gene trapped
    14
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Map7d1
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    46 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    736
  • Tissues
    5
  • cDNA Data
    136
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 245877 NCBI Gene Model | MGI Sequence Detail 24153 C57BL/6J ±  kb
transcript NM_144941 RefSeq | MGI Sequence Detail 3402 C57BL/6  
polypeptide A2AJI0 UniProt | EBI | MGI Sequence Detail 846 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000031125 MAP7 domain-containing protein 1
    (term hierarchy)
  • InterPro Domains
    IPR051483 Microtubule-associated protein 7 domain-containing protein
    IPR008604 Microtubule-associated protein 7 family
  • GlyGen
    A2AJI0 2 sites, 1 O-linked glycan (2 sites)
Molecular
Reagents
less
  • All nucleic 136
    cDNA 136

    Microarray probesets 5
Other
Accession IDs
less
MGI:2140518
References
more
  • Summaries
    All 38
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 14
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory