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Slc5a8 Gene Detail
Summary
  • Symbol
    Slc5a8
  • Name
    solute carrier family 5 (iodide transporter), member 8
  • Synonyms
    MGC:19357, SMCT
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384916
    NCBI Gene: 216225
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:88721854-88765377 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 44.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1112 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384916
 protein coding gene Chr10:88721854-88765377 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017633
 protein coding gene Chr10:90020668-90065805 (+)
A/J MGP_AJ_G0017612
 protein coding gene Chr10:86965825-87010751 (+)
AKR/J MGP_AKRJ_G0017570
 protein coding gene Chr10:89437384-89482220 (+)
BALB/cJ MGP_BALBcJ_G0017575
 protein coding gene Chr10:87229995-87274820 (+)
C3H/HeJ MGP_C3HHeJ_G0017398
 protein coding gene Chr10:89433854-89479423 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018032
 protein coding gene Chr10:93020816-93064504 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015714
 protein coding gene Chr10:82701146-82744975 (+)
CAST/EiJ MGP_CASTEiJ_G0016963
 protein coding gene Chr10:89336698-89384131 (+)
CBA/J MGP_CBAJ_G0017367
 protein coding gene Chr10:96895614-96941014 (+)
DBA/2J MGP_DBA2J_G0017473
 protein coding gene Chr10:86099709-86144061 (+)
FVB/NJ MGP_FVBNJ_G0017465
 protein coding gene Chr10:85303302-85347222 (+)
LP/J MGP_LPJ_G0017547
 protein coding gene Chr10:90684074-90730849 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017496
 protein coding gene Chr10:98372339-98427843 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018069
 protein coding gene Chr10:89293126-89340613 (+)
PWK/PhJ MGP_PWKPhJ_G0016744
 protein coding gene Chr10:86102428-86148300 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016532
 protein coding gene Chr10:88047149-88517304 (+)
WSB/EiJ MGP_WSBEiJ_G0017022
 protein coding gene Chr10:89273420-89330657 (+)



Homology
more
  • Human Ortholog
    SLC5A8, solute carrier family 5 member 8
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC5A8, solute carrier family 5 member 8
  • Synonyms
    AIT, SMCT, SMCT1
  • Links
    NCBI Gene ID: 160728
    neXtProt AC: NX_Q8N695
    UniProt: Q8N695

  • Chr Location
    12q23.1-q23.2; chr12:101155493-101210238 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    2 phenotypes from multigenic genotypes
    18 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit increased lactate concentrations in the saliva and urine.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    34
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    3
  • cDNA Data
    39
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 216225 NCBI Gene Model | MGI Sequence Detail 43524 C57BL/6J ±  kb
    transcript NM_145423 RefSeq | MGI Sequence Detail 5346 C57BL/6  
    polypeptide Q8BYF6 UniProt | EBI | MGI Sequence Detail 611 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 40
      cDNA 39
      Primer pair 1

      Microarray probesets 2
    References
    more
    • Summaries
      All 49
      Developmental Gene Expression 1
      Gene Ontology 10
      Phenotypes 18
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    10/29/2024
    MGI 6.24     		The Jackson Laboratory