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Rabl6 Gene Detail
Summary
  • Symbol
    Rabl6
  • Name
    RAB, member RAS oncogene family-like 6
  • Synonyms
    B230208H17Rik, Rbel1, Rbel1a, Rbel1b
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442633
    NCBI Gene: 227624
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:25473029-25498493 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 17.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    561 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442633
 protein coding gene Chr2:25473029-25498533 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025458
 protein coding gene Chr2:23485826-23517500 (-)
A/J MGP_AJ_G0025435
 protein coding gene Chr2:22571428-22598034 (-)
AKR/J MGP_AKRJ_G0025405
 protein coding gene Chr2:23340144-23365654 (-)
BALB/cJ MGP_BALBcJ_G0025431
 protein coding gene Chr2:22692238-22717915 (-)
C3H/HeJ MGP_C3HHeJ_G0025192
 protein coding gene Chr2:23270842-23298677 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025875
 protein coding gene Chr2:24224481-24255136 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023286
 protein coding gene Chr2:21482190-21507416 (-)
CAST/EiJ MGP_CASTEiJ_G0024655
 protein coding gene Chr2:23137807-23164965 (-)
CBA/J MGP_CBAJ_G0025170
 protein coding gene Chr2:25065111-25093283 (-)
DBA/2J MGP_DBA2J_G0025303
 protein coding gene Chr2:22412509-22444939 (-)
FVB/NJ MGP_FVBNJ_G0025265
 protein coding gene Chr2:22165233-22192351 (-)
LP/J MGP_LPJ_G0025389
 protein coding gene Chr2:23423324-23450082 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025296
 protein coding gene Chr2:25258109-25285984 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025934
 protein coding gene Chr2:23280971-23313691 (-)
PWK/PhJ MGP_PWKPhJ_G0024403
 protein coding gene Chr2:22233302-22258971 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024203
 protein coding gene Chr2:23424285-23451092 (-)
WSB/EiJ MGP_WSBEiJ_G0024724
 protein coding gene Chr2:23351221-23378883 (-)



Homology
more
  • Human Ortholog
    RABL6, RAB, member RAS oncogene family like 6
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RABL6, RAB, member RAS oncogene family like 6
  • Synonyms
    C9orf86, PARF, pp8875, RBEL1
  • Links
    NCBI Gene ID: 55684
    neXtProt AC: NX_Q3YEC7
    UniProt: Q3YEC7

  • Chr Location
    9q34.3; chr9:136807943-136841187 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    931
  • Tissues
    52
  • cDNA Data
    14
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 227624 NCBI Gene Model | MGI Sequence Detail 25465 C57BL/6J ±  kb
    transcript NM_001024616 RefSeq | MGI Sequence Detail 3191 C57BL/6  
    polypeptide Q5U3K5 UniProt | EBI | MGI Sequence Detail 725 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 14
      cDNA 14

      Microarray probesets 5
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 1
      Gene Ontology 4
      Phenotypes 11
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory