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Slc22a30 Gene Detail
Summary
  • Symbol
    Slc22a30
  • Name
    solute carrier family 22, member 30
  • Synonyms
    C730048C13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442750
    NCBI Gene: 319800
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:8312735-8382475 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 5.42 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1423 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442750
 protein coding gene Chr19:8312735-8382475 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0024740
 protein coding gene Chr19:4780426-5092950 (-)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0025212
 protein coding gene Chr19:5355585-5439738 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0024634
 protein coding gene Chr19:4916923-5165146 (-)
FVB/NJ MGP_FVBNJ_G0024599
 protein coding gene Chr19:4882776-4953376 (-)
LP/J MGP_LPJ_G0024721
 protein coding gene Chr19:4953372-4971839 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024628
 protein coding gene Chr19:5340463-5402656 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025263
 protein coding gene Chr19:5232139-5461728 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    SLC22A10, solute carrier family 22 member 10
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC22A10, solute carrier family 22 member 10
  • Synonyms
    hOAT5, OAT5
  • Links
    NCBI Gene ID: 387775
    neXtProt AC: NX_Q63ZE4
    UniProt: Q63ZE4

  • Chr Location
    11q12.3
  • Human Ortholog
    SLC22A25, solute carrier family 22 member 25
  • Synonyms
    HIMTP, UST6
  • Links
    NCBI Gene ID: 387601
    neXtProt AC: NX_Q6T423
    UniProt: Q6T423

  • Chr Location
    11q12.3; chr11:63158437-63243599 (-)  GRCh38
  • Human Ortholog
    SLC22A9, solute carrier family 22 member 9
  • Synonyms
    HOAT4, OAT4, OAT7, ust3, UST3H
  • Links
    NCBI Gene ID: 114571
    neXtProt AC: NX_Q8IVM8
    UniProt: Q8IVM8

  • Chr Location
    11q12.3; chr11:63369785-63410294 (+)  GRCh38
Human Diseases
more
  • Diseases
    2 with human SLC22A9 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    12
  • cDNA Data
    12
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319800 NCBI Gene Model | MGI Sequence Detail 69741 C57BL/6J ±  kb
transcript NM_177002 RefSeq | MGI Sequence Detail 2249 C57BL/6  
polypeptide NP_795976 RefSeq | MGI Sequence Detail 552 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR005828 Major facilitator, sugar transporter-like
    IPR011701 Major facilitator superfamily
    IPR020846 Major facilitator superfamily domain
    IPR036259 MFS transporter superfamily
Molecular
Reagents
less
  • All nucleic 13
    cDNA 12
    Primer pair 1

    Microarray probesets 7
Other
Accession IDs
less
MGI:2147468
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Gene Ontology 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory