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Slc41a2 Gene Detail
Summary
  • Symbol
    Slc41a2
  • Name
    solute carrier family 41, member 2
  • Synonyms
    A230035L05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442940
    NCBI Gene: 338365
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:83066712-83173746 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 41.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3131 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442940
 protein coding gene Chr10:83066712-83174657 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017584
 protein coding gene Chr10:84014547-84138021 (-)
A/J MGP_AJ_G0017564
 protein coding gene Chr10:81172342-81280624 (-)
AKR/J MGP_AKRJ_G0017523
 protein coding gene Chr10:83427453-83544027 (-)
BALB/cJ MGP_BALBcJ_G0017527
 protein coding gene Chr10:81445813-81553057 (-)
C3H/HeJ MGP_C3HHeJ_G0017349
 protein coding gene Chr10:83511309-83631356 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017984
 protein coding gene Chr10:86945293-87054970 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015668
 protein coding gene Chr10:76905438-77008803 (-)
CAST/EiJ MGP_CASTEiJ_G0016916
 protein coding gene Chr10:83442803-83560822 (-)
CBA/J MGP_CBAJ_G0017319
 protein coding gene Chr10:90529289-90652649 (-)
DBA/2J MGP_DBA2J_G0017425
 protein coding gene Chr10:80340897-80449030 (-)
FVB/NJ MGP_FVBNJ_G0017419
 protein coding gene Chr10:79579966-79689079 (-)
LP/J MGP_LPJ_G0017497
 protein coding gene Chr10:84655846-84775678 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017447
 protein coding gene Chr10:92167370-92287696 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018021
 protein coding gene Chr10:83369070-83483342 (-)
PWK/PhJ MGP_PWKPhJ_G0016697
 protein coding gene Chr10:80225243-80335296 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016487
 protein coding gene Chr10:82049486-82162776 (-)
WSB/EiJ MGP_WSBEiJ_G0016975
 protein coding gene Chr10:83400711-83516242 (-)



Homology
more
  • Human Ortholog
    SLC41A2, solute carrier family 41 member 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC41A2, solute carrier family 41 member 2
  • Synonyms
    SLC41A1-L1
  • Links
    NCBI Gene ID: 84102
    neXtProt AC: NX_Q96JW4
    UniProt: Q96JW4

  • Chr Location
    12q23.3; chr12:104801801-104958746 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    12
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    721
  • Tissues
    15
  • cDNA Data
    26
  • Literature Summary
    2
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034591 Ensembl Gene Model | MGI Sequence Detail 107035 C57BL/6J ±  kb
transcript ENSMUST00000039956 Ensembl | MGI Sequence Detail 4742 Not Applicable  
polypeptide ENSMUSP00000036690 Ensembl | MGI Sequence Detail 573 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000015140 solute carrier family 41 member 2
    (term hierarchy)
  • InterPro Domains
    IPR045349 SLC41A divalent cation transporter
    IPR036739 SLC41A/MgtE divalent cation transporters, integral membrane domain superfamily
    IPR006667 SLC41A/MgtE, integral membrane domain
Molecular
Reagents
less
  • All nucleic 27
    cDNA 26
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory