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Fndc7 Gene Detail
Summary
  • Symbol
    Fndc7
  • Name
    fibronectin type III domain containing 7
  • Synonyms
    E230011A21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443535
    NCBI Gene: 320181
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:108760994-108797324 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 47.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1222 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443535
 protein coding gene Chr3:108760898-108797324 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027787
 protein coding gene Chr3:110434757-110471668 (-)
A/J MGP_AJ_G0027747
 protein coding gene Chr3:106929954-106967229 (-)
AKR/J MGP_AKRJ_G0027712
 protein coding gene Chr3:109532833-109572809 (-)
BALB/cJ MGP_BALBcJ_G0027759
 protein coding gene Chr3:106630640-106666439 (-)
C3H/HeJ MGP_C3HHeJ_G0027489
 protein coding gene Chr3:109887588-109924960 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028203
 protein coding gene Chr3:114532700-114573630 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025541
 protein coding gene Chr3:103051034-103087370 (-)
CAST/EiJ MGP_CASTEiJ_G0026945
 protein coding gene Chr3:109275428-109315076 (-)
CBA/J MGP_CBAJ_G0027464
 protein coding gene Chr3:118452080-118494869 (-)
DBA/2J MGP_DBA2J_G0027606
 protein coding gene Chr3:106099178-106135709 (-)
FVB/NJ MGP_FVBNJ_G0027574
 protein coding gene Chr3:103984742-104021492 (-)
LP/J MGP_LPJ_G0027713
 protein coding gene Chr3:111859714-111897790 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027604
 protein coding gene Chr3:124499841-124542522 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028258
 protein coding gene Chr3:109133004-109172548 (-)
PWK/PhJ MGP_PWKPhJ_G0026671
 protein coding gene Chr3:105852292-105890256 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026491
 protein coding gene Chr3:107277713-107315411 (-)
WSB/EiJ MGP_WSBEiJ_G0027025
 protein coding gene Chr3:109667181-109708385 (-)



Homology
more
  • Human Ortholog
    FNDC7, fibronectin type III domain containing 7
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FNDC7, fibronectin type III domain containing 7
  • Links
    NCBI Gene ID: 163479
    neXtProt AC: NX_Q5VTL7
    UniProt: Q5VTL7

  • Chr Location
    1p13.3; chr1:108712908-108742749 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    11
  • cDNA Data
    12
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000045326 Ensembl Gene Model | MGI Sequence Detail 36331 C57BL/6J ±  kb
    transcript ENSMUST00000102620 Ensembl | MGI Sequence Detail 3477 Not Applicable  
    polypeptide ENSMUSP00000099680 Ensembl | MGI Sequence Detail 737 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 14
      Genomic 2
      cDNA 12

      Microarray probesets 6
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 1
      Diseases 1
      Gene Ontology 1
      Phenotypes 13
    • Earliest
      J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/17/2024
    MGI 6.24     		The Jackson Laboratory