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Scart2 Gene Detail
Summary
  • Symbol
    Scart2
  • Name
    scavenger receptor family member expressed on T cells 2
  • Synonyms
    5830411N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443685
    NCBI Gene: 244234
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:139827197-139880649 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 85.29 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1713 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443685
 protein coding gene Chr7:139827192-139880649 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033172
 protein coding gene Chr7:145342522-145395643 (+)
A/J MGP_AJ_G0033154
 protein coding gene Chr7:141191425-141244670 (+)
AKR/J MGP_AKRJ_G0033086
 protein coding gene Chr7:145045068-145110802 (+)
BALB/cJ MGP_BALBcJ_G0033155
 protein coding gene Chr7:140932535-140990093 (+)
C3H/HeJ MGP_C3HHeJ_G0032869
 protein coding gene Chr7:144842448-144900221 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033666
 protein coding gene Chr7:150674651-150740641 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030639
 protein coding gene Chr7:142320767-142379876 (+)
CAST/EiJ MGP_CASTEiJ_G0032199
 protein coding gene Chr7:137161263-137210067 (+)
CBA/J MGP_CBAJ_G0032842
 protein coding gene Chr7:155758600-155823717 (+)
DBA/2J MGP_DBA2J_G0032994
 protein coding gene Chr7:139159080-139212896 (+)
FVB/NJ MGP_FVBNJ_G0032947
 protein coding gene Chr7:139056790-139110260 (+)
LP/J MGP_LPJ_G0033088
 protein coding gene Chr7:146875393-146934218 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032979
 protein coding gene Chr7:156416362-156474912 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033686
 protein coding gene Chr7:144055672-144117728 (+)
PWK/PhJ MGP_PWKPhJ_G0031905
 protein coding gene Chr7:132344543-132403484 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031750
 protein coding gene Chr7:130880268-130935978 (+)
WSB/EiJ MGP_WSBEiJ_G0032310
 protein coding gene Chr7:144947470-145000160 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    713
  • Tissues
    6
  • cDNA Data
    4
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000054672 Ensembl Gene Model | MGI Sequence Detail 53453 C57BL/6J ±  kb
    transcript ENSMUST00000164583 Ensembl | MGI Sequence Detail 3342 Not Applicable  
    polypeptide ENSMUSP00000131905 Ensembl | MGI Sequence Detail 1112 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 4
      cDNA 4

      Microarray probesets 1
    Other
    Accession IDs
    less
    MGI:6455773
    References
    more
    • Summaries
      All 24
      Developmental Gene Expression 1
      Gene Ontology 1
      Phenotypes 11
    • Earliest
      J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory