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Bcorl1 Gene Detail
Summary
  • Symbol
    Bcorl1
  • Name
    BCL6 co-repressor-like 1
  • Synonyms
    6720425J07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443910
    NCBI Gene: 320376
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:47430235-47496926 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 25.64 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1157 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443910
 protein coding gene ChrX:47430235-47496945 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035691
 protein coding gene ChrX:43499956-43567706 (+)
A/J MGP_AJ_G0035674
 protein coding gene ChrX:43357490-43423773 (+)
AKR/J MGP_AKRJ_G0035594
 protein coding gene ChrX:44558568-44626269 (+)
BALB/cJ MGP_BALBcJ_G0035660
 protein coding gene ChrX:43004439-43068465 (+)
C3H/HeJ MGP_C3HHeJ_G0035364
 protein coding gene ChrX:43789509-43855251 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036189
 protein coding gene ChrX:44518456-44588924 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033041
 protein coding gene ChrX:41052388-41116082 (+)
CAST/EiJ MGP_CASTEiJ_G0034655
 protein coding gene ChrX:31369350-31436331 (+)
CBA/J MGP_CBAJ_G0035338
 protein coding gene ChrX:45767872-45844512 (+)
DBA/2J MGP_DBA2J_G0035492
 protein coding gene ChrX:43199765-43264253 (+)
FVB/NJ MGP_FVBNJ_G0035441
 protein coding gene ChrX:42918095-42982989 (+)
LP/J MGP_LPJ_G0035580
 protein coding gene ChrX:43845725-43913923 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035479
 protein coding gene ChrX:47209403-47273059 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036207
 protein coding gene ChrX:43395294-43465526 (+)
PWK/PhJ MGP_PWKPhJ_G0034354
 protein coding gene ChrX:30848384-30916119 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034199
 protein coding gene ChrX:32157799-32221340 (+)
WSB/EiJ MGP_WSBEiJ_G0034799
 protein coding gene ChrX:43036690-43107161 (+)



Homology
more
  • Human Ortholog
    BCORL1, BCL6 corepressor like 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    BCORL1, BCL6 corepressor like 1
  • Synonyms
    BCoR-L1, CXorf10, SHUVER
  • Links
    NCBI Gene ID: 63035
    neXtProt AC: NX_Q5H9F3
    UniProt: Q5H9F3

  • Chr Location
    Xq26.1; chrX:129980313-130058071 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human BCORL1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    26 phenotypes from 2 alleles in 2 genetic backgrounds
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit male infertility with oligozoospermia and abnormal sperm mitochondrial sheath morphology with large vacuoles.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    713
  • Tissues
    5
  • cDNA Data
    29
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000036959 Ensembl Gene Model | MGI Sequence Detail 66692 C57BL/6J ±  kb
    transcript ENSMUST00000136348 Ensembl | MGI Sequence Detail 7446 Not Applicable  
    polypeptide ENSMUSP00000122000 Ensembl | MGI Sequence Detail 1781 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 29
      cDNA 29

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1925143
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 1
      Gene Ontology 4
      Phenotypes 10
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/05/2024
    MGI 6.24     		The Jackson Laboratory