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Bend6 Gene Detail
Summary
  • Symbol
    Bend6
  • Name
    BEN domain containing 6
  • Synonyms
    B230209C24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444572
    NCBI Gene: 320705
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:33891133-33946897 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 12.85 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2263 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444572
 protein coding gene Chr1:33891133-33946925 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015905
 protein coding gene Chr1:32226980-32282493 (-)
A/J MGP_AJ_G0015889
 protein coding gene Chr1:31457371-31513112 (-)
AKR/J MGP_AKRJ_G0015845
 protein coding gene Chr1:31816783-31872276 (-)
BALB/cJ MGP_BALBcJ_G0015843
 protein coding gene Chr1:31094085-31149698 (-)
C3H/HeJ MGP_C3HHeJ_G0015677
 protein coding gene Chr1:32025251-32081040 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016296
 protein coding gene Chr1:33703221-33758863 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014018
 protein coding gene Chr1:28631144-28689842 (-)
CAST/EiJ MGP_CASTEiJ_G0015257
 protein coding gene Chr1:31861550-31924572 (-)
CBA/J MGP_CBAJ_G0015648
 protein coding gene Chr1:34624832-34680491 (-)
DBA/2J MGP_DBA2J_G0015749
 protein coding gene Chr1:30782204-30839935 (-)
FVB/NJ MGP_FVBNJ_G0015751
 protein coding gene Chr1:30327260-30383387 (-)
LP/J MGP_LPJ_G0015819
 protein coding gene Chr1:32569778-32625362 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015771
 protein coding gene Chr1:36912748-36970304 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016343
 protein coding gene Chr1:31799239-31857458 (-)
PWK/PhJ MGP_PWKPhJ_G0015040
 protein coding gene Chr1:30505469-30565347 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014823
 protein coding gene Chr1:31783311-31838919 (-)
WSB/EiJ MGP_WSBEiJ_G0015319
 protein coding gene Chr1:31788221-31846149 (-)



Homology
more
  • Human Ortholog
    BEND6, BEN domain containing 6
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    BEND6, BEN domain containing 6
  • Synonyms
    C6orf65
  • Links
    NCBI Gene ID: 221336
    neXtProt AC: NX_Q5SZJ8
    UniProt: Q5SZJ8

  • Chr Location
    6p12.1; chr6:56955107-57027346 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    721
  • Tissues
    12
  • cDNA Data
    16
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000042182 Ensembl Gene Model | MGI Sequence Detail 55765 C57BL/6J ±  kb
transcript ENSMUST00000062289 Ensembl | MGI Sequence Detail 2487 Not Applicable  
polypeptide ENSMUSP00000052919 Ensembl | MGI Sequence Detail 281 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 34
    Developmental Gene Expression 3
    Gene Ontology 7
    Phenotypes 9
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory