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Vsig10 Gene Detail
Summary
  • Symbol
    Vsig10
  • Name
    V-set and immunoglobulin domain containing 10
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448533
    NCBI Gene: 231668
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:117457331-117493071 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 56.88 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1022 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448533
 protein coding gene Chr5:117457148-117493071 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029986
 protein coding gene Chr5:120391357-120439540 (+)
A/J MGP_AJ_G0029950
 protein coding gene Chr5:115502069-115538024 (+)
AKR/J MGP_AKRJ_G0029889
 protein coding gene Chr5:119234599-119270669 (+)
BALB/cJ MGP_BALBcJ_G0029961
 protein coding gene Chr5:116920018-116956543 (+)
C3H/HeJ MGP_C3HHeJ_G0029681
 protein coding gene Chr5:119749307-119791626 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030416
 protein coding gene Chr5:124977997-125020441 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027642
 protein coding gene Chr5:110264162-110299566 (+)
CAST/EiJ MGP_CASTEiJ_G0029090
 protein coding gene Chr5:118757226-118795420 (+)
CBA/J MGP_CBAJ_G0029649
 protein coding gene Chr5:129800142-129844069 (+)
DBA/2J MGP_DBA2J_G0029799
 protein coding gene Chr5:115599120-115636592 (+)
FVB/NJ MGP_FVBNJ_G0029755
 protein coding gene Chr5:114465508-114501639 (+)
LP/J MGP_LPJ_G0029887
 protein coding gene Chr5:120897656-120935954 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029786
 protein coding gene Chr5:134026219-134063107 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030457
 protein coding gene Chr5:118756465-118795668 (+)
PWK/PhJ MGP_PWKPhJ_G0028803
 protein coding gene Chr5:114288005-114329050 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028641
 protein coding gene Chr5:116315823-116361491 (+)
WSB/EiJ MGP_WSBEiJ_G0029165
 protein coding gene Chr5:119327795-119367628 (+)



Homology
more
  • Human Ortholog
    VSIG10, V-set and immunoglobulin domain containing 10
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VSIG10, V-set and immunoglobulin domain containing 10
  • Links
    NCBI Gene ID: 54621
    neXtProt AC: NX_Q8N0Z9
    UniProt: Q8N0Z9

  • Chr Location
    12q24.23; chr12:118063593-118136026 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    22
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 231668 NCBI Gene Model | MGI Sequence Detail 35741 C57BL/6J ±  kb
transcript NM_001033311 RefSeq | MGI Sequence Detail 4054 C57BL/6  
polypeptide D3YX43 UniProt | EBI | MGI Sequence Detail 558 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 22
    cDNA 22

    Microarray probesets 4
References
more
  • Summaries
    All 32
    Gene Ontology 2
    Phenotypes 14
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory