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Kctd11 Gene Detail
Summary
  • Symbol
    Kctd11
  • Name
    potassium channel tetramerisation domain containing 11
  • Synonyms
    Ren
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448712
    NCBI Gene: 216858
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:69769090-69771811 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 42.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    103 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448712
 protein coding gene Chr11:69769087-69772232 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018564
 protein coding gene Chr11:70362804-70365955 (-)
A/J MGP_AJ_G0018532
 protein coding gene Chr11:67699096-67702239 (-)
AKR/J MGP_AKRJ_G0018501
 protein coding gene Chr11:69722402-69725541 (-)
BALB/cJ MGP_BALBcJ_G0018504
 protein coding gene Chr11:68028246-68031395 (-)
C3H/HeJ MGP_C3HHeJ_G0018317
 protein coding gene Chr11:69754954-69758103 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018955
 protein coding gene Chr11:72488516-72491661 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016600
 protein coding gene Chr11:64626597-64629743 (-)
CAST/EiJ MGP_CASTEiJ_G0017872
 protein coding gene Chr11:69999505-70002658 (-)
CBA/J MGP_CBAJ_G0018290
 protein coding gene Chr11:75726528-75729677 (-)
DBA/2J MGP_DBA2J_G0018399
 protein coding gene Chr11:67284278-67287408 (-)
FVB/NJ MGP_FVBNJ_G0018389
 protein coding gene Chr11:66926270-66929409 (-)
LP/J MGP_LPJ_G0018469
 protein coding gene Chr11:70937343-70940494 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018412
 protein coding gene Chr11:76335028-76338177 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018997
 protein coding gene Chr11:69980953-69984102 (-)
PWK/PhJ MGP_PWKPhJ_G0017646
 protein coding gene Chr11:67934958-67938088 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017436
 protein coding gene Chr11:69798956-69802117 (-)
WSB/EiJ MGP_WSBEiJ_G0017926
 protein coding gene Chr11:69655448-69658583 (-)



Homology
more
  • Human Ortholog
    KCTD11, potassium channel tetramerization domain containing 11
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KCTD11, potassium channel tetramerization domain containing 11
  • Synonyms
    C17orf36, KCASH1, REN, REN/KCTD11
  • Links
    NCBI Gene ID: 147040
    neXtProt AC: NX_Q693B1
    UniProt: Q693B1

  • Chr Location
    17p13.1; chr17:7351889-7354944 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    817
  • Tissues
    65
  • cDNA Data
    32
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 216858 NCBI Gene Model | MGI Sequence Detail 2722 C57BL/6J ±  kb
    transcript NM_153143 RefSeq | MGI Sequence Detail 2740 C57BL/6  
    polypeptide Q8K485 UniProt | EBI | MGI Sequence Detail 232 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      3 Sequences
    • Protein Ontology
      PR:000009272 BTB/POZ domain-containing protein KCTD11
      (term hierarchy)
    • InterPro Domains
      IPR000210 BTB/POZ domain
      IPR045763 BTB/POZ domain-containing protein KCTD11/21, C-terminal domain
      IPR003131 Potassium channel tetramerisation-type BTB domain
      IPR011333 SKP1/BTB/POZ domain superfamily
    Molecular
    Reagents
    less
    • All nucleic 33
      cDNA 32
      Primer pair 1

      Microarray probesets 3
    References
    more
    • Summaries
      All 37
      Developmental Gene Expression 2
      Gene Ontology 7
      Phenotypes 11
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:345824 Lospinoso Severini L, et al., SALL4 is a CRL3(REN/KCTD11) substrate that drives Sonic Hedgehog-dependent medulloblastoma. Cell Death Differ. 2024 Feb;31(2):170-187
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory