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Tbc1d17 Gene Detail
Summary
  • Symbol
    Tbc1d17
  • Name
    TBC1 domain family, member 17
  • Synonyms
    MGC:27642
  • Feature Type
    protein coding gene
  • IDs
    MGI:2449973
    NCBI Gene: 233204
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:44490200-44498314 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 28.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    228 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2449973
 protein coding gene Chr7:44484047-44498503 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032180
 protein coding gene Chr7:45048932-45057106 (-)
A/J MGP_AJ_G0032159
 protein coding gene Chr7:44204450-44212624 (-)
AKR/J MGP_AKRJ_G0032095
 protein coding gene Chr7:45420385-45428562 (-)
BALB/cJ MGP_BALBcJ_G0032171
 protein coding gene Chr7:44204223-44212396 (-)
C3H/HeJ MGP_C3HHeJ_G0031887
 protein coding gene Chr7:45923397-45931570 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032663
 protein coding gene Chr7:47313162-47321339 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029677
 protein coding gene Chr7:46774838-46783019 (-)
CAST/EiJ MGP_CASTEiJ_G0031215
 protein coding gene Chr7:37291771-37299871 (-)
CBA/J MGP_CBAJ_G0031851
 protein coding gene Chr7:48863627-48871801 (-)
DBA/2J MGP_DBA2J_G0032009
 protein coding gene Chr7:43875321-43883495 (-)
FVB/NJ MGP_FVBNJ_G0031960
 protein coding gene Chr7:43651610-43659788 (-)
LP/J MGP_LPJ_G0032087
 protein coding gene Chr7:45731386-45739563 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031997
 protein coding gene Chr7:47601511-47609688 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032679
 protein coding gene Chr7:44644625-44652802 (-)
PWK/PhJ MGP_PWKPhJ_G0030938
 protein coding gene Chr7:37239285-37247643 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030775
 protein coding gene Chr7:32645276-32653605 (-)
WSB/EiJ MGP_WSBEiJ_G0031332
 protein coding gene Chr7:45119398-45127569 (-)



Homology
more
  • Human Ortholog
    TBC1D17, TBC1 domain family member 17
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TBC1D17, TBC1 domain family member 17
  • Links
    NCBI Gene ID: 79735
    neXtProt AC: NX_Q9HA65
    UniProt: Q9HA65

  • Chr Location
    19q13.33; chr19:49877666-49888750 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    735
  • Tissues
    29
  • cDNA Data
    97
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 233204 NCBI Gene Model | MGI Sequence Detail 8115 C57BL/6J ±  kb
transcript NR_185168 RefSeq | MGI Sequence Detail 2481 C57BL/6  
polypeptide Q8BYH7 UniProt | EBI | MGI Sequence Detail 645 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 98
    cDNA 98

    Microarray probesets 4
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:37359 Chu CC, et al., Fig1, an interleukin 4-induced mouse B cell gene isolated by cDNA representational difference analysis. Proc Natl Acad Sci U S A. 1997 Mar 18;94(6):2507-12
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory