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Defb34 Gene Detail
Summary
  • Symbol
    Defb34
  • Name
    defensin beta 34
  • Feature Type
    protein coding gene
  • IDs
    MGI:2672979
    NCBI Gene: 360211
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:19173768-19176556 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 10.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    244 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2672979
 protein coding gene Chr8:19173744-19176556 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033412
 protein coding gene Chr8:16609813-16612602 (+)
A/J MGP_AJ_G0033393
 protein coding gene Chr8:16036096-16038885 (+)
AKR/J MGP_AKRJ_G0033323
 protein coding gene Chr8:16521197-16523985 (+)
BALB/cJ MGP_BALBcJ_G0033393
 protein coding gene Chr8:16155505-16158294 (+)
C3H/HeJ MGP_C3HHeJ_G0033105
 protein coding gene Chr8:16719412-16722201 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033906
 protein coding gene Chr8:17150981-17153769 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030873
 protein coding gene Chr8:15319429-15322206 (+)
CAST/EiJ MGP_CASTEiJ_G0032428
 protein coding gene Chr8:16552273-16555051 (+)
CBA/J MGP_CBAJ_G0033079
 protein coding gene Chr8:17910870-17913659 (+)
DBA/2J MGP_DBA2J_G0033233
 protein coding gene Chr8:15989486-15992275 (+)
FVB/NJ MGP_FVBNJ_G0033181
 protein coding gene Chr8:15997324-16000113 (+)
LP/J MGP_LPJ_G0033326
 protein coding gene Chr8:16666805-16669589 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033218
 protein coding gene Chr8:18038091-18040880 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033923
 protein coding gene Chr8:16526299-16529087 (+)
PWK/PhJ MGP_PWKPhJ_G0032141
 protein coding gene Chr8:16009411-16012536 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031982
 protein coding gene Chr8:16446266-16451954 (+)
WSB/EiJ MGP_WSBEiJ_G0032545
 protein coding gene Chr8:16623830-16626619 (+)



Homology
more
  • Human Ortholog
    DEFB106A, defensin beta 106A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DEFB106A, defensin beta 106A
  • Synonyms
    BD-6, DEFB106, DEFB-6
  • Links
    NCBI Gene ID: 245909
    neXtProt AC: NX_Q8N104
    UniProt: Q8N104

  • Chr Location
    8p23.1
  • Human Ortholog
    DEFB106B, defensin beta 106B
  • Synonyms
    BD-6, DEFB-6
  • Links
    NCBI Gene ID: 503841
    neXtProt AC: NX_Q8N104
    UniProt: Q8N104

  • Chr Location
    8p23.1
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052554 Ensembl Gene Model | MGI Sequence Detail 2789 C57BL/6J ±  kb
transcript ENSMUST00000064475 Ensembl | MGI Sequence Detail 246 Not Applicable  
polypeptide ENSMUSP00000064554 Ensembl | MGI Sequence Detail 81 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 19
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:93238 Zaballos A, et al., Identification on mouse chromosome 8 of new beta-defensin genes with regionally specific expression in the male reproductive organ. J Biol Chem. 2004 Apr 26;279(13):12421-6
  • Latest
    J:332494 Dong X, et al., Keratinocyte-derived defensins activate neutrophil-specific receptors Mrgpra2a/b to prevent skin dysbiosis and bacterial infection. Immunity. 2022 Jul 15;55(9):1645-1662
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory