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Rnf149 Gene Detail
Summary
  • Symbol
    Rnf149
  • Name
    ring finger protein 149
  • Synonyms
    1600023E10Rik, Greul4
  • Feature Type
    protein coding gene
  • IDs
    MGI:2677438
    NCBI Gene: 67702
  • Alliance
    gene page
  • Transcription Start Sites
    17 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:39590377-39616486 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 18.33 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    616 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2677438
 protein coding gene Chr1:39590375-39616885 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015959
 protein coding gene Chr1:38297912-38323905 (-)
A/J MGP_AJ_G0015943
 protein coding gene Chr1:37227122-37253179 (-)
AKR/J MGP_AKRJ_G0015898
 protein coding gene Chr1:37729914-37755905 (-)
BALB/cJ MGP_BALBcJ_G0015897
 protein coding gene Chr1:36875172-36901583 (-)
C3H/HeJ MGP_C3HHeJ_G0015730
 protein coding gene Chr1:37991831-38017830 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016350
 protein coding gene Chr1:39894804-39921804 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014072
 protein coding gene Chr1:34191062-34216537 (-)
CAST/EiJ MGP_CASTEiJ_G0015311
 protein coding gene Chr1:37870447-37897286 (-)
CBA/J MGP_CBAJ_G0015702
 protein coding gene Chr1:41047769-41075829 (-)
DBA/2J MGP_DBA2J_G0015803
 protein coding gene Chr1:36511659-36537685 (-)
FVB/NJ MGP_FVBNJ_G0015805
 protein coding gene Chr1:36046350-36072516 (-)
LP/J MGP_LPJ_G0015873
 protein coding gene Chr1:38636299-38663208 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015825
 protein coding gene Chr1:43096035-43122244 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016397
 protein coding gene Chr1:37849577-37876962 (-)
PWK/PhJ MGP_PWKPhJ_G0015094
 protein coding gene Chr1:36327632-36353917 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014876
 protein coding gene Chr1:37785135-37812678 (-)
WSB/EiJ MGP_WSBEiJ_G0015373
 protein coding gene Chr1:37804220-37830218 (-)



Homology
more
  • Human Ortholog
    RNF149, ring finger protein 149
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNF149, ring finger protein 149
  • Synonyms
    DNAPTP2
  • Links
    NCBI Gene ID: 284996
    neXtProt AC: NX_Q8NC42
    UniProt: Q8NC42

  • Chr Location
    2q11.2; chr2:101271219-101308701 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Gene trapped
    2
  • Targeted
    3
  • Genomic Mutations
    1 involving Rnf149
  • Find Mice (IMSR)
    12 strains or lines available
Mice homozygous for a null mutation display hyperproliferation of several hematological cell lineages.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    855
  • Tissues
    128
  • cDNA Data
    122
  • Literature Summary
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048234 Ensembl Gene Model | MGI Sequence Detail 26110 C57BL/6J ±  kb
transcript ENSMUST00000062525 Ensembl | MGI Sequence Detail 2492 Not Applicable  
polypeptide ENSMUSP00000050388 Ensembl | MGI Sequence Detail 394 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 124
    cDNA 123
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1914952, MGI:2138516, MGI:2138655
References
more
  • Summaries
    All 40
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:335358 Legesse A, et al., The role of RNF149 in the pre-emptive quality control substrate ubiquitination. Commun Biol. 2023 Apr 8;6(1):385
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory