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Yjefn3 Gene Detail
Summary
  • Symbol
    Yjefn3
  • Name
    YjeF N-terminal domain containing 3
  • Synonyms
    LOC234365
  • Feature Type
    protein coding gene
  • IDs
    MGI:2681845
    NCBI Gene: 234365
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:70340438-70346633 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 34.02 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    246 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2681845
 protein coding gene Chr8:70340438-70355362 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033681
 protein coding gene Chr8:70116920-70131634 (-)
A/J MGP_AJ_G0033664
 protein coding gene Chr8:67268890-67284076 (-)
AKR/J MGP_AKRJ_G0033589
 protein coding gene Chr8:69175542-69190267 (-)
BALB/cJ MGP_BALBcJ_G0033660
 protein coding gene Chr8:67495164-67510236 (-)
C3H/HeJ MGP_C3HHeJ_G0033370
 protein coding gene Chr8:69836830-69851488 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034177
 protein coding gene Chr8:72784833-72799818 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031121
 protein coding gene Chr8:62092726-62108352 (-)
CAST/EiJ MGP_CASTEiJ_G0032695
 protein coding gene Chr8:69296879-69316333 (-)
CBA/J MGP_CBAJ_G0033348
 protein coding gene Chr8:75422828-75437509 (-)
DBA/2J MGP_DBA2J_G0033502
 protein coding gene Chr8:66995355-67010469 (-)
FVB/NJ MGP_FVBNJ_G0033443
 protein coding gene Chr8:66091458-66107120 (-)
LP/J MGP_LPJ_G0033589
 protein coding gene Chr8:70167229-70181945 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033487
 protein coding gene Chr8:78080050-78094982 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034195
 protein coding gene Chr8:69357521-69373139 (-)
PWK/PhJ MGP_PWKPhJ_G0032403
 protein coding gene Chr8:66279935-66295099 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032239
 protein coding gene Chr8:68333782-68349876 (-)
WSB/EiJ MGP_WSBEiJ_G0032810
 protein coding gene Chr8:69726484-69742179 (-)



Homology
more
  • Human Ortholog
    YJEFN3, YjeF N-terminal domain containing 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    YJEFN3, YjeF N-terminal domain containing 3
  • Links
    NCBI Gene ID: 374887
    neXtProt AC: NX_A6XGL0
    UniProt: A6XGL0

  • Chr Location
    19p13.11; chr19:19528861-19537581 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    2
  • Targeted
    1
  • Genomic Mutations
    1 involving Yjefn3
  • Find Mice (IMSR)
    11 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    5
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 234365 NCBI Gene Model | MGI Sequence Detail 6196 C57BL/6J ±  kb
transcript NM_001353930 RefSeq | MGI Sequence Detail 793 C57BL/6  
polypeptide F6W8I0 UniProt | EBI | MGI Sequence Detail 251 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
Other
Accession IDs
less
MGI:2685021
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:237827 Gineste C, et al., In vivo and in vitro investigations of heterozygous nebulin knock-out mice disclose a mild skeletal muscle phenotype. Neuromuscul Disord. 2013 Apr;23(4):357-69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory