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Ankub1 Gene Detail
Summary
  • Symbol
    Ankub1
  • Name
    ankyrin repeat and ubiquitin domain containing 1
  • Synonyms
    Gm410, LOC242037
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685256
    NCBI Gene: 242037
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:57574843-57599958 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 27.97 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    697 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685256
 protein coding gene Chr3:57564814-57600220 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027231
 protein coding gene Chr3:56457638-56488441 (-)
A/J MGP_AJ_G0027191
 protein coding gene Chr3:54708633-54739679 (-)
AKR/J MGP_AKRJ_G0027161
 protein coding gene Chr3:55843679-55873368 (-)
BALB/cJ MGP_BALBcJ_G0027204
 protein coding gene Chr3:54533315-54564043 (-)
C3H/HeJ MGP_C3HHeJ_G0026947
 protein coding gene Chr3:56033199-56068179 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027650
 protein coding gene Chr3:58555334-58588933 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0026399
 protein coding gene Chr3:56197717-56230707 (-)
CBA/J MGP_CBAJ_G0026923
 protein coding gene Chr3:60481653-60516549 (-)
DBA/2J MGP_DBA2J_G0027057
 protein coding gene Chr3:54204963-54235682 (-)
FVB/NJ MGP_FVBNJ_G0027025
 protein coding gene Chr3:53183579-53215797 (-)
LP/J MGP_LPJ_G0027169
 protein coding gene Chr3:57202703-57232347 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027043
 protein coding gene Chr3:64572228-64608500 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027708
 protein coding gene Chr3:55775829-55811239 (-)
PWK/PhJ MGP_PWKPhJ_G0026131
 protein coding gene Chr3:53853767-53890471 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025944
 protein coding gene Chr3:55460473-55490850 (-)
WSB/EiJ MGP_WSBEiJ_G0026473
 protein coding gene Chr3:55864481-55902935 (-)



Homology
more
  • Human Ortholog
    ANKUB1, ankyrin repeat and ubiquitin domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ANKUB1, ankyrin repeat and ubiquitin domain containing 1
  • Synonyms
    C3orf16
  • Links
    NCBI Gene ID: 389161
    neXtProt AC: NX_A6NFN9
    UniProt: A6NFN9

  • Chr Location
    3q25.1; chr3:149761100-149968385 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    720
  • Tissues
    8
  • cDNA Data
    3
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 242037 NCBI Gene Model | MGI Sequence Detail 25116 C57BL/6J ±  kb
    transcript NM_001433276 RefSeq | MGI Sequence Detail 2544 C57BL/6  
    polypeptide Q3UUE9 UniProt | EBI | MGI Sequence Detail 192 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 3
      cDNA 3

      Microarray probesets 2
    References
    more
    • Summaries
      All 27
      Developmental Gene Expression 1
      Diseases 1
      Phenotypes 11
    • Earliest
      J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory