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Zmym5 Gene Detail
Summary
  • Symbol
    Zmym5
  • Name
    zinc finger, MYM-type 5
  • Synonyms
    9830124H08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3041170
    NCBI Gene: 219105
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:57028042-57049173 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 28.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    421 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041170
 protein coding gene Chr14:57028042-57049213 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021398
 protein coding gene Chr14:50893978-50917403 (-)
A/J MGP_AJ_G0021357
 protein coding gene Chr14:49877106-49894190 (-)
AKR/J MGP_AKRJ_G0021333
 protein coding gene Chr14:51684245-51699487 (-)
BALB/cJ MGP_BALBcJ_G0021360
 protein coding gene Chr14:49867098-49895861 (-)
C3H/HeJ MGP_C3HHeJ_G0021141
 protein coding gene Chr14:51322342-51340210 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021800
 protein coding gene Chr14:53431832-53452094 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019342
 protein coding gene Chr14:48036971-48057990 (-)
CAST/EiJ MGP_CASTEiJ_G0020660
 protein coding gene Chr14:47655860-47681073 (-)
CBA/J MGP_CBAJ_G0021108
 protein coding gene Chr14:55004855-55035619 (-)
DBA/2J MGP_DBA2J_G0021228
 protein coding gene Chr14:49596350-49612207 (-)
FVB/NJ MGP_FVBNJ_G0021211
 protein coding gene Chr14:48989625-49018464 (-)
LP/J MGP_LPJ_G0021303
 protein coding gene Chr14:51959822-51982164 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021235
 protein coding gene Chr14:54406473-54427255 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021826
 protein coding gene Chr14:50819978-50841672 (-)
PWK/PhJ MGP_PWKPhJ_G0020403
 protein coding gene Chr14:46123597-46134681 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020233
 protein coding gene Chr14:46882026-46904832 (-)
WSB/EiJ MGP_WSBEiJ_G0020712
 protein coding gene Chr14:51161634-51187570 (-)



Homology
more
  • Human Ortholog
    ZMYM5, zinc finger MYM-type containing 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZMYM5, zinc finger MYM-type containing 5
  • Synonyms
    HSPC050, MYM, ZNF198L1, ZNF237
  • Links
    NCBI Gene ID: 9205
    neXtProt AC: NX_Q9UJ78
    UniProt: Q9UJ78

  • Chr Location
    13q12.11; chr13:19823482-19863649 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    767
  • Tissues
    40
  • cDNA Data
    71
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040123 Ensembl Gene Model | MGI Sequence Detail 21132 C57BL/6J ±  kb
transcript ENSMUST00000111285 Ensembl | MGI Sequence Detail 5351 Not Applicable  
polypeptide ENSMUSP00000106916 Ensembl | MGI Sequence Detail 627 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 72
    cDNA 71
    Primer pair 1

    Microarray probesets 6
References
more
  • Summaries
    All 31
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory