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Ttc22 Gene Detail
Summary
  • Symbol
    Ttc22
  • Name
    tetratricopeptide repeat domain 22
  • Synonyms
    4732467L16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045307
    NCBI Gene: 230576
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:106479646-106497393 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 49.67 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    602 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045307
 protein coding gene Chr4:106479629-106497393 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028522
 protein coding gene Chr4:107260004-107277711 (+)
A/J MGP_AJ_G0028485
 protein coding gene Chr4:103427796-103445503 (+)
AKR/J MGP_AKRJ_G0028432
 protein coding gene Chr4:105941044-105958776 (+)
BALB/cJ MGP_BALBcJ_G0028504
 protein coding gene Chr4:103615068-103632734 (+)
C3H/HeJ MGP_C3HHeJ_G0028218
 protein coding gene Chr4:106694869-106712535 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028944
 protein coding gene Chr4:111130397-111149541 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026235
 protein coding gene Chr4:98703808-98722058 (+)
CAST/EiJ MGP_CASTEiJ_G0027654
 protein coding gene Chr4:104492196-104509971 (+)
CBA/J MGP_CBAJ_G0028187
 protein coding gene Chr4:114716492-114734158 (+)
DBA/2J MGP_DBA2J_G0028335
 protein coding gene Chr4:103044713-103062372 (+)
FVB/NJ MGP_FVBNJ_G0028303
 protein coding gene Chr4:101900460-101918159 (+)
LP/J MGP_LPJ_G0028436
 protein coding gene Chr4:107459247-107476833 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028329
 protein coding gene Chr4:120043413-120061079 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028980
 protein coding gene Chr4:106190060-106207795 (+)
PWK/PhJ MGP_PWKPhJ_G0027380
 protein coding gene Chr4:101279779-101303848 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027204
 protein coding gene Chr4:103569506-103587168 (+)
WSB/EiJ MGP_WSBEiJ_G0027735
 protein coding gene Chr4:106360636-106378294 (+)



Homology
more
  • Human Ortholog
    TTC22, tetratricopeptide repeat domain 22
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TTC22, tetratricopeptide repeat domain 22
  • Links
    NCBI Gene ID: 55001
    neXtProt AC: NX_Q5TAA0
    UniProt: Q5TAA0

  • Chr Location
    1p32.3; chr1:54779712-54801323 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    755
  • Tissues
    5
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 230576 NCBI Gene Model | MGI Sequence Detail 17748 C57BL/6J ±  kb
transcript NM_177667 RefSeq | MGI Sequence Detail 2538 C57BL/6  
polypeptide Q8C159 UniProt | EBI | MGI Sequence Detail 568 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Phenotypes 12
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory