Emx2os MGI Mouse Gene Detail - MGI:3052329 - Emx2 opposite strand/antisense transcript, non-protein coding

Sequence Map

Chr19:59413536-59447067 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3052329	antisense lncRNA gene	Chr19:59413536-59447067 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003491	antisense lncRNA gene	Chr19:59946169-59982384 (-)
A/J	MGP_AJ_G0003471	antisense lncRNA gene	Chr19:57019796-57054873 (-)
AKR/J	MGP_AKRJ_G0003450	antisense lncRNA gene	Chr19:58788823-58823631 (-)
BALB/cJ	MGP_BALBcJ_G0003460	antisense lncRNA gene	Chr19:57086751-57120343 (-)
C3H/HeJ	MGP_C3HHeJ_G0003408	antisense lncRNA gene	Chr19:59049150-59084050 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003598	antisense lncRNA gene	Chr19:61385525-61420651 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003108	antisense lncRNA gene	Chr19:55909274-55944364 (-)
CAST/EiJ	MGP_CASTEiJ_G0003371	antisense lncRNA gene	Chr19:59137575-59171152 (-)
CBA/J	MGP_CBAJ_G0003405	antisense lncRNA gene	Chr19:64392633-64429799 (-)
DBA/2J	MGP_DBA2J_G0003413	antisense lncRNA gene	Chr19:56784743-56818329 (-)
FVB/NJ	MGP_FVBNJ_G0003432	antisense lncRNA gene	Chr19:56509591-56543275 (-)
LP/J	MGP_LPJ_G0003486	antisense lncRNA gene	Chr19:59813117-59848093 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003420	antisense lncRNA gene	Chr19:63595384-63630120 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003601	antisense lncRNA gene	Chr19:59040557-59075520 (-)
PWK/PhJ	MGP_PWKPhJ_G0003327	antisense lncRNA gene	Chr19:56781467-56816175 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003272	antisense lncRNA gene	Chr19:57694137-57732113 (-)
WSB/EiJ	MGP_WSBEiJ_G0003406	antisense lncRNA gene	Chr19:59143352-59178376 (-)

Vertebrate Orthology Source

Alliance of Genome Resources

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	329078	NCBI Gene Model \| MGI Sequence Detail	33532	C57BL/6J	± kb
	transcript	NR_002863	RefSeq \| MGI Sequence Detail	5023	C57BL/6

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Summaries

All 13
Earliest

J:82004 Noonan FC, et al., Antisense transcripts at the EMX2 locus in human and mouse( small star, filled ). Genomics. 2003 Jan;81(1):58-66

TSS for Emx2os:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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