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Sertm1 Gene Detail
Summary
  • Symbol
    Sertm1
  • Name
    serine rich and transmembrane domain containing 1
  • Synonyms
    6030405A18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3607715
    NCBI Gene: 329641
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:54804489-54823308 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 25.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    627 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3607715
 protein coding gene Chr3:54804489-54823308 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027218
 protein coding gene Chr3:53614471-53635224 (-)
A/J MGP_AJ_G0027178
 protein coding gene Chr3:51954565-51974331 (-)
AKR/J MGP_AKRJ_G0027148
 protein coding gene Chr3:53024749-53044061 (-)
BALB/cJ MGP_BALBcJ_G0027191
 protein coding gene Chr3:51807376-51826646 (-)
C3H/HeJ MGP_C3HHeJ_G0026934
 protein coding gene Chr3:53230837-53250388 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027637
 protein coding gene Chr3:55649374-55668068 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024996
 protein coding gene Chr3:48469256-48488566 (-)
CAST/EiJ MGP_CASTEiJ_G0026386
 protein coding gene Chr3:53362657-53386316 (-)
CBA/J MGP_CBAJ_G0026910
 protein coding gene Chr3:57434164-57454749 (-)
DBA/2J MGP_DBA2J_G0027044
 protein coding gene Chr3:51509300-51528668 (-)
FVB/NJ MGP_FVBNJ_G0027012
 protein coding gene Chr3:50481448-50500141 (-)
LP/J MGP_LPJ_G0027156
 protein coding gene Chr3:54322711-54344243 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027030
 protein coding gene Chr3:61543609-61562815 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027695
 protein coding gene Chr3:52937953-52959987 (-)
PWK/PhJ MGP_PWKPhJ_G0026118
 protein coding gene Chr3:51180742-51199924 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025931
 protein coding gene Chr3:52693731-52712476 (-)
WSB/EiJ MGP_WSBEiJ_G0026460
 protein coding gene Chr3:53068375-53087862 (-)



Homology
more
  • Human Ortholog
    SERTM1, serine rich and transmembrane domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SERTM1, serine rich and transmembrane domain containing 1
  • Synonyms
    C13orf36
  • Links
    NCBI Gene ID: 400120
    neXtProt AC: NX_A2A2V5
    UniProt: A2A2V5

  • Chr Location
    13q13.3; chr13:36674020-36697839 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 329641 NCBI Gene Model | MGI Sequence Detail 18820 C57BL/6J ±  kb
transcript NM_177854 RefSeq | MGI Sequence Detail 3086 C57BL/6  
polypeptide Q8CD78 UniProt | EBI | MGI Sequence Detail 107 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000031083 serine-rich and transmembrane domain-containing protein 1
    (term hierarchy)
  • InterPro Domains
    IPR031741 Serine-rich and transmembrane domain-containing protein
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 4
    Phenotypes 9
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory