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Mir9-3 Gene Detail
Summary
  • Symbol
    Mir9-3
  • Name
    microRNA 9-3
  • Synonyms
    mir 9-3, Mirn9-3, mmu-mir-9-3
  • Feature Type
    miRNA gene
  • IDs
    MGI:3619443
    NCBI Gene: 723968
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:79155012-79155101 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 45.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3619443
 miRNA gene Chr7:79155012-79155101 (+)
129S1/SvImJ MGP_129S1SvImJ_G0009039
 miRNA gene Chr7:81391754-81391843 (+)
A/J MGP_AJ_G0009022
 miRNA gene Chr7:79514369-79514458 (+)
AKR/J MGP_AKRJ_G0009011
 miRNA gene Chr7:81217583-81217672 (+)
BALB/cJ MGP_BALBcJ_G0009008
 miRNA gene Chr7:79209911-79210000 (+)
C3H/HeJ MGP_C3HHeJ_G0008946
 miRNA gene Chr7:81881167-81881256 (+)
C57BL/6NJ MGP_C57BL6NJ_G0009247
 miRNA gene Chr7:84593463-84593552 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0008128
 miRNA gene Chr7:82055733-82055822 (+)
CAST/EiJ MGP_CASTEiJ_G0008783
 miRNA gene Chr7:72751650-72751739 (+)
CBA/J MGP_CBAJ_G0008917
 miRNA gene Chr7:87423903-87423992 (+)
DBA/2J MGP_DBA2J_G0008945
 miRNA gene Chr7:78089314-78089403 (+)
FVB/NJ MGP_FVBNJ_G0008965
 miRNA gene Chr7:78001937-78002026 (+)
LP/J MGP_LPJ_G0009042
 miRNA gene Chr7:82642237-82642326 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0008930
 miRNA gene Chr7:87610080-87610169 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0009216
 miRNA gene Chr7:80671509-80671598 (+)
PWK/PhJ MGP_PWKPhJ_G0008712
 miRNA gene Chr7:71255272-71255361 (+)
SPRET/EiJ MGP_SPRETEiJ_G0008553
 miRNA gene Chr7:67656603-67656692 (+)
WSB/EiJ MGP_WSBEiJ_G0008878
 miRNA gene Chr7:80994683-80994772 (+)



Homology
more
  • Human Ortholog
    MIR9-3, microRNA 9-3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR9-3, microRNA 9-3
  • Synonyms
    hsa-mir-9-3, mir-9-3, MIRN9-3, miRNA9-3
  • Links
    NCBI Gene ID: 407051

  • Chr Location
    chr15:89368017-89368106 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human MIR9-3 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    23 phenotypes from multigenic genotypes
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Male and female mice homozygous for a null mutation are infertile.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    841
  • Tissues
    64
  • Literature Summary
    29
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      25
    • RefSeq
      1
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 723968 NCBI Gene Model | MGI Sequence Detail 90 C57BL/6J ±  kb
    transcript NR_029818 RefSeq | MGI Sequence Detail 90 C57BL/6  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 19
      Genomic 1
      Primer pair 8
      Other 10
    Other Database
    Links
    less
    miRBase MI0000721
    References
    more
    • Summaries
      All 59
      Developmental Gene Expression 29
      Gene Ontology 6
      Phenotypes 13
    • Earliest
      J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
    • Latest
      J:323544 Cordeiro B, et al., MicroRNA-9 Fine-Tunes Dendritic Cell Function by Suppressing Negative Regulators in a Cell-Type-Specific Manner. Cell Rep. 2020 May 5;31(5):107585
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    10/29/2024
    MGI 6.24     		The Jackson Laboratory