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Vmn2r90 Gene Detail
Summary
  • Symbol
    Vmn2r90
  • Name
    vomeronasal 2, receptor 90
  • Synonyms
    EG626942
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645076
    NCBI Gene: 626942
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr17:17924203-17954429 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 10.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1188 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645076
 protein coding gene Chr17:17924009-17955418 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023183
 protein coding gene Chr17:15689074-15734650 (+)
A/J MGP_AJ_G0023148
 protein coding gene Chr17:15351552-15384168 (+)
AKR/J MGP_AKRJ_G0023118
 protein coding gene Chr17:15425092-15456298 (+)
BALB/cJ MGP_BALBcJ_G0023148
 protein coding gene Chr17:15284446-15316237 (+)
C3H/HeJ MGP_C3HHeJ_G0022908
 protein coding gene Chr17:15625596-15663706 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023591
 protein coding gene Chr17:16488677-16524904 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0022427
 protein coding gene Chr17:15439227-15477364 (+)
CBA/J MGP_CBAJ_G0022885
 protein coding gene Chr17:17036257-17069118 (+)
DBA/2J MGP_DBA2J_G0023018
 protein coding gene Chr17:15052297-15088797 (+)
FVB/NJ MGP_FVBNJ_G0022986
 protein coding gene Chr17:14879283-14910597 (+)
LP/J MGP_LPJ_G0023092
 protein coding gene Chr17:15676259-15710432 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023007
 protein coding gene Chr17:16629777-16667605 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023628
 protein coding gene Chr17:15596532-15636943 (+)
PWK/PhJ MGP_PWKPhJ_G0022176
 protein coding gene Chr17:14693495-14731017 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022004
 protein coding gene Chr17:14676350-14724638 (+)
WSB/EiJ MGP_WSBEiJ_G0022486
 protein coding gene Chr17:15891271-15925700 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 626942 NCBI Gene Model | MGI Sequence Detail 30227 C57BL/6J ±  kb
transcript NM_001104539 RefSeq | MGI Sequence Detail 2592 C57BL/6  
polypeptide NP_001098009 RefSeq | MGI Sequence Detail 863 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR000337 GPCR, family 3
    IPR017978 GPCR family 3, C-terminal
    IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
    IPR011500 GPCR, family 3, nine cysteines domain
    IPR038550 GPCR, family 3, nine cysteines domain superfamily
    IPR004073 GPCR, family 3, vomeronasal receptor, type 2
    IPR028082 Periplasmic binding protein-like I
    IPR001828 Receptor, ligand binding region
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 11
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory