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Otogl Gene Detail
Summary
  • Symbol
    Otogl
  • Name
    otogelin-like
  • Synonyms
    Gm6924
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647600
    NCBI Gene: 628870
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:107596392-107747995 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 56.11 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    5194 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647600
 protein coding gene Chr10:107596391-107748240 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017711
 protein coding gene Chr10:109983698-110142793 (-)
A/J MGP_AJ_G0017688
 protein coding gene Chr10:105850373-105993527 (-)
AKR/J MGP_AKRJ_G0017650
 protein coding gene Chr10:108921385-109070991 (-)
BALB/cJ MGP_BALBcJ_G0017652
 protein coding gene Chr10:106235984-106381579 (-)
C3H/HeJ MGP_C3HHeJ_G0017477
 protein coding gene Chr10:109040283-109194437 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018109
 protein coding gene Chr10:113805828-113981427 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015788
 protein coding gene Chr10:100768457-100909229 (-)
CAST/EiJ MGP_CASTEiJ_G0017038
 protein coding gene Chr10:109128011-109297004 (-)
CBA/J MGP_CBAJ_G0017446
 protein coding gene Chr10:118225370-118395182 (-)
DBA/2J MGP_DBA2J_G0017551
 protein coding gene Chr10:104991182-105139838 (-)
FVB/NJ MGP_FVBNJ_G0017545
 protein coding gene Chr10:103988563-104135390 (-)
LP/J MGP_LPJ_G0017625
 protein coding gene Chr10:110591854-110757846 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017574
 protein coding gene Chr10:120730359-120956340 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018147
 protein coding gene Chr10:108922178-109080221 (-)
PWK/PhJ MGP_PWKPhJ_G0016820
 protein coding gene Chr10:105055562-105203058 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016610
 protein coding gene Chr10:107671909-107839262 (-)
WSB/EiJ MGP_WSBEiJ_G0017098
 protein coding gene Chr10:109040233-109199504 (-)



Homology
more
  • Human Ortholog
    OTOGL, otogelin like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OTOGL, otogelin like
  • Synonyms
    C12orf64, DFNB84B
  • Links
    NCBI Gene ID: 283310
    UniProt: Q3ZCN5

  • Chr Location
    12q21.31; chr12:80099537-80380880 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human OTOGL associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    732
  • Tissues
    16
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000091455 Ensembl Gene Model | MGI Sequence Detail 151604 C57BL/6J ±  kb
    transcript ENSMUST00000165341 Ensembl | MGI Sequence Detail 8763 Not Applicable  
    polypeptide ENSMUSP00000129467 Ensembl | MGI Sequence Detail 2325 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • Protein Ontology
      PR:000031268 otogelin-like protein
      (term hierarchy)
    • InterPro Domains
      IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain
      IPR036195 Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily
      IPR006207 Cystine knot, C-terminal
      IPR050780 Mucin/von Willebrand/Thrombospondin superfamily
      IPR036084 Serine protease inhibitor-like superfamily
      IPR002919 Trypsin Inhibitor-like, cysteine rich domain
      IPR001846 von Willebrand factor, type D domain
      IPR001007 VWFC domain
      IPR014853 VWF/SSPO/Zonadhesin-like, cysteine-rich domain
    • GlyGen
      F7A4A7 8 sites, 1 O-linked glycan (1 site)
    Molecular
    Reagents
    less
    • All nucleic 3
      Primer pair 2
      Other 1

      Microarray probesets 1
    References
    more
    • Summaries
      All 24
      Developmental Gene Expression 1
      Gene Ontology 4
      Phenotypes 10
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory