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Ccl19-ps4 Pseudogene Detail
Summary
  • Symbol
    Ccl19-ps4
  • Name
    C-C motif chemokine ligand 19, pseudogene 4
  • Synonyms
    ENSMUSG00000072143, Gm2564
Location &
Maps
more
  • Sequence Map
    Chr4:42629897-42631507 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 22.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    5
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3708691
 pseudogene Chr4:42629753-42631714 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0028144
 protein coding gene Chr4:38253675-38290394 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0028159
 protein coding gene Chr4:39028535-39030742 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0027961
 protein coding gene Chr4:37499550-37503065 (-)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0027055
 protein coding gene Chr4:38565091-38574346 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CCL19, C-C motif chemokine ligand 19
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCL19, C-C motif chemokine ligand 19
  • Synonyms
    CKb11, ELC, MIP-3b, MIP3B, SCYA19
  • Links
    NCBI Gene ID: 6363
    neXtProt AC: NX_Q99731
    UniProt: Q99731

  • Chr Location
    9p13.3; chr9:34689570-34691276 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    22
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    9
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091938 Ensembl Gene Model | MGI Sequence Detail 1611 C57BL/6J ±  kb
transcript ENSMUST00000166898 Ensembl | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:7489583
References
more
  • Summaries
    All 8
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:164563 The Gene Ontology Consortium, Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs. 2010 Oct;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory