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Scgb2a2 Gene Detail
Summary
  • Symbol
    Scgb2a2
  • Name
    secretoglobin, family 2A, member 2
  • Feature Type
    protein coding gene
  • IDs
    MGI:3780828
    NCBI Gene: 102639117
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:9824922-9829564 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    104 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3780828
 protein coding gene Chr19:9824922-9830172 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024831
 protein coding gene Chr19:7140639-7145885 (+)
A/J MGP_AJ_G0024799
 protein coding gene Chr19:6631990-6637236 (+)
AKR/J MGP_AKRJ_G0024774
 protein coding gene Chr19:6907064-6912307 (+)
BALB/cJ MGP_BALBcJ_G0024799
 protein coding gene Chr19:6690013-6695253 (+)
C3H/HeJ MGP_C3HHeJ_G0024565
 protein coding gene Chr19:6793851-6799084 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025247
 protein coding gene Chr19:7439507-7444753 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0024038
 protein coding gene Chr19:6447294-6452544 (+)
CBA/J MGP_CBAJ_G0024539
 protein coding gene Chr19:7520867-7526111 (+)
DBA/2J MGP_DBA2J_G0024666
 protein coding gene Chr19:6665013-6670259 (+)
FVB/NJ MGP_FVBNJ_G0024633
 protein coding gene Chr19:6697097-6702339 (+)
LP/J MGP_LPJ_G0024753
 protein coding gene Chr19:7121833-7127079 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024660
 protein coding gene Chr19:7437296-7442540 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025295
 protein coding gene Chr19:6938540-6943784 (+)
PWK/PhJ MGP_PWKPhJ_G0023783
 protein coding gene Chr19:5988095-5989359 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023588
 protein coding gene Chr19:6100682-6108886 (+)
WSB/EiJ MGP_WSBEiJ_G0024100
 protein coding gene Chr19:6820749-6826001 (+)



Homology
more
  • Human Ortholog
    SCGB2A1, secretoglobin family 2A member 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SCGB2A1, secretoglobin family 2A member 1
  • Synonyms
    LPHC, LPNC, MGB2, UGB3
  • Links
    NCBI Gene ID: 4246
    neXtProt AC: NX_O75556
    UniProt: O75556

  • Chr Location
    11q12.3; chr11:62208673-62213943 (+)  GRCh38
  • Human Ortholog
    SCGB2A2, secretoglobin family 2A member 2
  • Synonyms
    MGB1, PSBP1, UGB2
  • Links
    NCBI Gene ID: 4250
    neXtProt AC: NX_Q13296
    UniProt: Q13296

  • Chr Location
    11q12.3; chr11:62270158-62273160 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102639117 NCBI Gene Model | MGI Sequence Detail 4643 C57BL/6J ±  kb
transcript NM_001378410 RefSeq | MGI Sequence Detail 503 ZRU/MplStud  
polypeptide NP_001365339 RefSeq | MGI Sequence Detail 96 ZRU/MplStud  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016126 Secretoglobin
    IPR035960 Secretoglobin superfamily
References
more
  • Summaries
    All 9
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:293217 GemPharmatech, GemPharmatech Website. 2020;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory