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Smim17 Gene Detail
Summary
  • Symbol
    Smim17
  • Name
    small integral membrane protein 17
  • Synonyms
    Gm16532
  • Feature Type
    protein coding gene
  • IDs
    MGI:4365374
    NCBI Gene: 100042450
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:6418193-6434085 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 3.71 cM
Strain
Comparison
more
  • SNPs within 2kb
    687 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4365374
 protein coding gene Chr7:6401714-6435092 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031603
 protein coding gene Chr7:3486160-3528229 (+)
A/J MGP_AJ_G0031577
 protein coding gene Chr7:3385921-3420973 (+)
AKR/J MGP_AKRJ_G0031506
 protein coding gene Chr7:3613298-3654857 (+)
BALB/cJ MGP_BALBcJ_G0031585
 protein coding gene Chr7:3491829-3527807 (+)
C3H/HeJ MGP_C3HHeJ_G0031306
 protein coding gene Chr7:3465461-3499359 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032048
 protein coding gene Chr7:3686084-3724604 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029162
 protein coding gene Chr7:3081385-3113058 (+)
CAST/EiJ MGP_CASTEiJ_G0030669
 protein coding gene Chr7:3358961-3401246 (+)
CBA/J MGP_CBAJ_G0031263
 protein coding gene Chr7:3796960-3838063 (+)
DBA/2J MGP_DBA2J_G0031421
 protein coding gene Chr7:3409598-3443599 (+)
FVB/NJ MGP_FVBNJ_G0031376
 protein coding gene Chr7:3405312-3441854 (+)
LP/J MGP_LPJ_G0031507
 protein coding gene Chr7:3592810-3633116 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031414
 protein coding gene Chr7:3783405-3833727 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032077
 protein coding gene Chr7:3417651-3457286 (+)
PWK/PhJ MGP_PWKPhJ_G0030396
 protein coding gene Chr7:3594977-3629551 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030223
 protein coding gene Chr7:2999120-3034897 (+)
WSB/EiJ MGP_WSBEiJ_G0030763
 protein coding gene Chr7:3561029-3598057 (+)



Homology
more
  • Human Ortholog
    SMIM17, small integral membrane protein 17
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SMIM17, small integral membrane protein 17
  • Links
    NCBI Gene ID: 147670
    neXtProt AC: NX_P0DL12
    UniProt: P0DL12

  • Chr Location
    19q13.43; chr19:56643159-56657247 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100042450 NCBI Gene Model | MGI Sequence Detail 15893 C57BL/6J ±  kb
transcript NM_001134752 RefSeq | MGI Sequence Detail 2171 C57BL/6  
polypeptide NP_001128224 RefSeq | MGI Sequence Detail 109 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 10
    Phenotypes 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:188991 The Jackson Laboratory, Alleles produced for the KOMP project by The Jackson Laboratory. MGI Direct Data Submission. 2012;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory