About   Help   FAQ
Ighv5-2 Gene Detail
Summary
  • Symbol
    Ighv5-2
  • Name
    immunoglobulin heavy variable 5-2
  • Synonyms
    Gm16969
  • Feature Type
    gene segment
  • IDs
    MGI:4439893
    NCBI Gene: 777685
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:113542124-113542610 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 62.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439893
 gene segment Chr12:113542124-113542610 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000047
 gene segment Chr12:116146894-116147380 (-)
A/J MGP_AJ_G0000046
 gene segment Chr12:111642634-111643120 (-)
AKR/J MGP_AKRJ_G0000047
 gene segment Chr12:114989369-114989840 (-)
BALB/cJ MGP_BALBcJ_G0000045
 gene segment Chr12:112111274-112111760 (-)
C3H/HeJ MGP_C3HHeJ_G0000041
 gene segment Chr12:115427668-115428153 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000052
 gene segment Chr12:119683662-119684148 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000029
 gene segment Chr12:108308424-108308911 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0000042
 gene segment Chr12:124270039-124270524 (-)
DBA/2J MGP_DBA2J_G0000044
 gene segment Chr12:111160333-111160819 (-)
FVB/NJ MGP_FVBNJ_G0000040
 gene segment Chr12:109965908-109966388 (-)
LP/J MGP_LPJ_G0000047
 gene segment Chr12:116005514-116006000 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000044
 gene segment Chr12:127377355-127377841 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000053
 gene segment Chr12:114399154-114399649 (-)
PWK/PhJ MGP_PWKPhJ_G0000041
 gene segment Chr12:105844868-105845347 (-)
SPRET/EiJ MGP_SPRETEiJ_G0000035
 gene segment Chr12:108558953-108559432 (-)
WSB/EiJ MGP_WSBEiJ_G0000046
 gene segment Chr12:115316569-115317049 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 777685 NCBI Gene Model | MGI Sequence Detail 487 C57BL/6J ±  kb
polypeptide A0A0A6YVX8 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR050199 Immunoglobulin Heavy Variable
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 5
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory